PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Tp57577_TGAC_v2_mRNA33215

Organism

Trifolium pratense

Taxonomic ID

57577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium

Family

bHLH

Protein Properties

Length: 767aa MW: 86165 Da PI: 6.5128

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Tp57577_TGAC_v2_mRNA33215	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32	2.2e-10	648	694	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+ i ++f L ++P + kK +K+ iL +A +Y+k+Lq Tp57577_TGAC_v2_mRNA33215 648 EHIIAERKRRKIISERFIALAAIIPGL-----KKTDKVYILGEAFNYVKQLQ 694 699**********************.....9****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF53756	6.67E-115	6	464	No hit	No description
Pfam	PF00201	5.6E-20	241	396	IPR002213	UDP-glucuronosyl/UDP-glucosyltransferase
Gene3D	G3DSA:3.40.50.2000	3.3E-6	261	405	No hit	No description
PROSITE pattern	PS00375	0	347	390	IPR002213	UDP-glucuronosyl/UDP-glucosyltransferase
PROSITE profile	PS50888	13.579	644	693	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.8E-14	648	706	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	6.8E-8	648	694	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.7E-14	648	705	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.46E-10	649	698	No hit	No description
SMART	SM00353	7.2E-11	650	699	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008152	Biological Process	metabolic process
GO:0016758	Molecular Function	transferase activity, transferring hexosyl groups
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 767 aa Download sequence Send to blast
MEKTIHIAVV PGVGYSHLVP ILEFSKLLVQ HHPYIHVTCI IPTLGSPPSS SKTILQTLPS 60 NINHTFLPPV QPNDLPQGLS LQMKIQRTVT HSLPYLHQAL KSFASRTPLV ALVVDLFAVE 120 ALDFAKEFNM LSYIYYPVAA NTLAWKFYLP KLDEETSCKY IDLPEPIKIP GCVPLHGRDL 180 FTAAGDRSSQ AYKHLLQLCK SFSLADGVLV NSFLEMEMGP IKALTEEESR KGKPSVYPVG 240 PIIQTVTSSC DDANGLECLS WLDKQQPCSV LYVSFGSGGT LSQEQIDELA LGLELSNQRF 300 LWVVRAPSSS SSSTAYFSAQ NDLDPLQFLP SGFLERTKEK GMVIPSWAPQ IQILSHGSIG 360 GFLSHCGWNS VLESVMHGVP LITWPLFAEQ RMNAVLLSEG LKVGLRPRVH ENGIVGRVEI 420 SHVIKCLMEG EEGEKLRNNM KELKEAANSA LKEDGSSTKT LSQLALKWRN LLKLKALIFE 480 NWAELSYKTS YRVLSNFSLD GRFVGKLDFF FGNETLILII EMGGDKSLPM DDDKFLIENV 540 QEPTFPFENA NNSQFSTIVD NVCVTTTIHE KMLNNSNSSN SLISQEYYDA TNSKQLEPSQ 600 FILSFENTTV EPSPNSATFL SIMDNNVSEL PKVKQRTKNH RSSSEIQEHI IAERKRRKII 660 SERFIALAAI IPGLKKTDKV YILGEAFNYV KQLQEKVKEL EDHQNKRKKD DSIILIKKYQ 720 GCTIEEKGNS CEENSDEHRY YXXXXXXXXX XXXXXXXXXX XXXXFW*

Sequence ? help Back to Top

Protein Sequence Length: 767 aa Download sequence Send to blast

MEKTIHIAVV PGVGYSHLVP ILEFSKLLVQ HHPYIHVTCI IPTLGSPPSS SKTILQTLPS  60
NINHTFLPPV QPNDLPQGLS LQMKIQRTVT HSLPYLHQAL KSFASRTPLV ALVVDLFAVE  120
ALDFAKEFNM LSYIYYPVAA NTLAWKFYLP KLDEETSCKY IDLPEPIKIP GCVPLHGRDL  180
FTAAGDRSSQ AYKHLLQLCK SFSLADGVLV NSFLEMEMGP IKALTEEESR KGKPSVYPVG  240
PIIQTVTSSC DDANGLECLS WLDKQQPCSV LYVSFGSGGT LSQEQIDELA LGLELSNQRF  300
LWVVRAPSSS SSSTAYFSAQ NDLDPLQFLP SGFLERTKEK GMVIPSWAPQ IQILSHGSIG  360
GFLSHCGWNS VLESVMHGVP LITWPLFAEQ RMNAVLLSEG LKVGLRPRVH ENGIVGRVEI  420
SHVIKCLMEG EEGEKLRNNM KELKEAANSA LKEDGSSTKT LSQLALKWRN LLKLKALIFE  480
NWAELSYKTS YRVLSNFSLD GRFVGKLDFF FGNETLILII EMGGDKSLPM DDDKFLIENV  540
QEPTFPFENA NNSQFSTIVD NVCVTTTIHE KMLNNSNSSN SLISQEYYDA TNSKQLEPSQ  600
FILSFENTTV EPSPNSATFL SIMDNNVSEL PKVKQRTKNH RSSSEIQEHI IAERKRRKII  660
SERFIALAAI IPGLKKTDKV YILGEAFNYV KQLQEKVKEL EDHQNKRKKD DSIILIKKYQ  720
GCTIEEKGNS CEENSDEHRY YXXXXXXXXX XXXXXXXXXX XXXXFW*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2vce_A	1e-169	3	469	5	468	HYDROQUINONE GLUCOSYLTRANSFERASE
2vch_A	1e-169	3	469	5	468	HYDROQUINONE GLUCOSYLTRANSFERASE
2vg8_A	1e-169	3	469	5	468	HYDROQUINONE GLUCOSYLTRANSFERASE
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Functional Description ? help Back to Top
Source	Description
UniProt	Broad spectrum multifunctional glucosyltransferase. In addition to hydroquinone it accept at least 45 natural and synthetic phenols as well as two cinnamyl alcohols as substrates. Hydroquinone was however the best substrate. In contrast to this broad acceptor substrate specificity, only pyrimidine nucleotide activated glucose is tolerated as a donor substrate.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Tp57577_TGAC_v2_mRNA33215

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_013443944.2	0.0	hydroquinone glucosyltransferase
Swissprot	Q9AR73	0.0	HQGT_RAUSE; Hydroquinone glucosyltransferase
TrEMBL	A0A2K3PBC5	0.0	A0A2K3PBC5_TRIPR; Glycosyltransferase
STRING	AET01255	0.0	(Medicago truncatula)
STRING	AET01262	0.0	(Medicago truncatula)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	1e-20	bHLH family protein

Link Out ? help Back to Top
Phytozome	Tp57577_TGAC_v2_mRNA33215

Publications ? help Back to Top
Arend J,Warzecha H,Stöckigt J Hydroquinone: O-glucosyltransferase from cultivated Rauvolfia cells: enrichment and partial amino acid sequences. Phytochemistry, 2000. 53(2): p. 187-93 [PMID:10680170] Hefner T,Arend J,Warzecha H,Siems K,Stöckigt J Arbutin synthase, a novel member of the NRD1beta glycosyltransferase family, is a unique multifunctional enzyme converting various natural products and xenobiotics. Bioorg. Med. Chem., 2002. 10(6): p. 1731-41 [PMID:11937332]