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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA32482 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
GATA |
Protein Properties |
Length: 538aa MW: 59483 Da PI: 7.0756 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA32482 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 50.4 | 3.1e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg+t+TplWR+gp ++ LCnaCG ++r kg+
Tp57577_TGAC_v2_mRNA32482 7 CHHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGT 41
****************66666***********997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 538 aa
Download sequence Send
to blast |
MGKHGPCHHC GVTSTPLWRN GPPEKPILCN ACGSRWRTKG TLANYTPLHA RAETDDFDDQ 60 KASRVKSVSL NKNKEVKSLK RKQNRDNVAS GGFAYDYNQG FQKAVDEDIS NRSSSGSALS 120 NSESCAQFGG TDASDLTGPA QSVVWDTTVP SKKRTCVGRS KPSSVEKLTK DLCTILHEQQ 180 SYFSASSEED LLYESEAPMV SVEIGHGSVL IRHPSYVARD EESEASSLSF DNRQYLMSEA 240 YSYSGAVLTH NGSSRTNFSS QGAGKARNSA VHGMKQEQVK SDKSQIEREQ ILGSHDSPLC 300 LIDLNDVVNY EEFSRNLSNE EQQQLLKFLP AVDTAKLPDS LNVMFDSSQF KENLTYFQQL 360 LVEGVFDISL SGAKPEDCKT LKRYALSNFT KSKWVEHYHL LKRCKNRAEK SDTPGSAASA 420 NIANTKRKRD SRIQNFSEVK TIMRSPKRII TKTSYEGKLV DDGSFYNPKS LFPLPPDASS 480 HLLDSFNFVE DSSDQDLLLD VPSNNSFPQA ELLHPNLSYG AQASTSSSSA YSHLMNH*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CR931735 | 1e-129 | CR931735.1 Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE. |