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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp57577_TGAC_v2_mRNA31441 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
VOZ |
| Protein Properties |
Length: 489aa MW: 54505.4 Da PI: 6.4547 |
| Description |
VOZ family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA31441 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | VOZ | 356.7 | 9.2e-110 | 245 | 463 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaa 84
pppsafl+pkcalwdc rpaq +++q yc s h++la+ eglpg+tp+lrp+gid+kdg+lfaa+ ak+ gkevgip+cegaa
Tp57577_TGAC_v2_mRNA31441 245 PPPSAFLSPKCALWDCIRPAQ--KQCQGYCCSSHEHLAISEGLPGMTPILRPGGIDVKDGPLFAAVLAKTMGKEVGIPKCEGAA 326
89******************8..68*********************************************************** PP
VOZ 85 takspwnaaelfdlsll.....egetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpss 163
++k+pwna+ +f + ++ wlffdkprraf+sg rkqrslpdy+grgwhesrkqvmke+gg+krsyymdpqp++
Tp57577_TGAC_v2_mRNA31441 327 STKAPWNASVFFFFFFFlxxxxXXXXXXXWLFFDKPRRAFDSGTRKQRSLPDYHGRGWHESRKQVMKEHGGQKRSYYMDPQPPN 410
*********98766544121113345679*****************************************************98 PP
VOZ 164 sfewhlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
+whlyeyein+ d +alyrlelklvd+kks+kgkvskdsl+dl++k+g+lta
Tp57577_TGAC_v2_mRNA31441 411 R-DWHLYEYEINSHDGCALYRLELKLVDKKKSPKGKVSKDSLNDLENKMGKLTA 463
5.9*************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 489 aa
Download sequence Send
to blast |
MMKGNSKGKY GSSSSSSQKS TKEKEKHLVD KIQGIFTNLQ SARKESRAND IVICEEQMHQ 60
LLREWKAELE SPATSLADGS LGSFTGELAQ LLQEIEEKDD ATSPFTSPVP LKTGLHQNNI 120
SDGNYPFFLE NCFENNQTLD HTFKGSASSL FNSPLNNSDM AQLDFHQFGL NQDMDHNAVG 180
HNSDLIGRFN LYQDQSLGHN TEIKNSESTQ FSFEEGIDCS QFFGDNDTTT FGDNLIPNIL 240
PNICPPPSAF LSPKCALWDC IRPAQKQCQG YCCSSHEHLA ISEGLPGMTP ILRPGGIDVK 300
DGPLFAAVLA KTMGKEVGIP KCEGAASTKA PWNASVFFFF FFFLXXXXXX XXXXXWLFFD 360
KPRRAFDSGT RKQRSLPDYH GRGWHESRKQ VMKEHGGQKR SYYMDPQPPN RDWHLYEYEI 420
NSHDGCALYR LELKLVDKKK SPKGKVSKDS LNDLENKMGK LTAAPLPDNG KSIEGKTDAK 480
SENVGLPA*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC171618 | 1e-172 | AC171618.20 Medicago truncatula clone mth2-144n17, complete sequence. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Yasui Y,Kohchi T
VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
[PMID:25351333] - Kumar S,Choudhary P,Gupta M,Nath U
VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
Plant Physiol., 2018. 176(4): p. 2917-2930
[PMID:29507119] - Song C,Lee J,Kim T,Hong JC,Lim CO
VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
Planta, 2018. 247(6): p. 1439-1448
[PMID:29536220]
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