PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp57577_TGAC_v2_mRNA31221 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family | bZIP | ||||||||
Protein Properties | Length: 147aa MW: 16737 Da PI: 6.525 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.7 | 2.2e-12 | 58 | 103 | 4 | 49 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ rr+q+NRe+ArrsR RKk +e+L+++ L+ eN++Lk++l Tp57577_TGAC_v2_mRNA31221 58 ERKLRRMQSNRESARRSRCRKKTHLENLTNRLNRLKIENQQLKNQL 103 5789***************************************665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.1E-10 | 52 | 104 | No hit | No description |
SMART | SM00338 | 1.5E-11 | 55 | 119 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.703 | 57 | 104 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.0E-10 | 58 | 103 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.54E-11 | 59 | 113 | No hit | No description |
CDD | cd14702 | 7.62E-16 | 60 | 110 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 62 | 77 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MLFQTEEAVQ LPYPPVLETM LSESEIQYLI SLINQPEDPT SPSSGSQGSN RTVYSSEERK 60 LRRMQSNRES ARRSRCRKKT HLENLTNRLN RLKIENQQLK NQLAFTMNQH LLLSLENDQL 120 ISESVDLLAT LSDLCTILSN TSITMP* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp57577_TGAC_v2_mRNA31221 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013461806.1 | 2e-72 | basic leucine zipper 4 | ||||
TrEMBL | A0A2K3LAQ0 | 1e-99 | A0A2K3LAQ0_TRIPR; Ocs element-binding factor 1-like protein | ||||
STRING | GLYMA06G05111.1 | 5e-63 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 2e-21 | basic leucine-zipper 5 |
Link Out ? help Back to Top | |
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Phytozome | Tp57577_TGAC_v2_mRNA31221 |