 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp57577_TGAC_v2_mRNA30860 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
|
| Family |
Dof |
| Protein Properties |
Length: 355aa MW: 38861.1 Da PI: 8.5628 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA30860 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 121.7 | 2.5e-38 | 43 | 101 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
+ a+kcprCds ntkfCyynnysl+qPr+fCk+CrryWt+GG+lrnvPvGgg+rk++k
Tp57577_TGAC_v2_mRNA30860 43 KVAIKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTNGGSLRNVPVGGGCRKKQKF 101
5679***************************************************9975 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MMPPNNNTPQ DHDQNKNQQK QQEQVSSSET KKRPSSSTSD EQKVAIKCPR CDSPNTKFCY 60
YNNYSLTQPR HFCKTCRRYW TNGGSLRNVP VGGGCRKKQK FKHSSSQSIL SKYSSSPSLD 120
FHLGGLLPLP LPLPLPFSSK VHHHANHQPF LNNQFSSSFQ LDHSLSSNSL MGLNNLYPFS 180
SSNGNGIFNG ANGMNFMNVN SASAITTNST SLASSIESLS CMNQDLHLKL QQQRLATMFG 240
GGDDNKKDDI NGISSSNVLV SGQVSSIEKP QTILFQNLDI SKTNVPNGGD APMEWLFGNS 300
YSSFMMTPTI TTSSIGGVCI NGDHDHGNNN GWINNGVNAW SDVQQQQQPY TALP*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC174360 | 8e-75 | AC174360.8 Medicago truncatula chromosome 8 clone mth2-31a5, complete sequence. |
