PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp57577_TGAC_v2_mRNA29748 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family | bZIP | ||||||||
Protein Properties | Length: 148aa MW: 17301.6 Da PI: 7.608 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37 | 7.4e-12 | 62 | 107 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ rr+q+NRe+ArrsR RKk +e+L + L+ eN++Lk++l Tp57577_TGAC_v2_mRNA29748 62 RKIRRMQSNRESARRSRWRKKRHVENLNNDLNRLKMENRELKNQLG 107 5789**************************************8775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-9 | 58 | 122 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.082 | 60 | 106 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.1E-9 | 62 | 109 | No hit | No description |
SuperFamily | SSF57959 | 9.14E-12 | 62 | 116 | No hit | No description |
Pfam | PF00170 | 8.2E-8 | 62 | 108 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 9.04E-14 | 63 | 111 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 65 | 80 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence Send to blast |
MSSFYEEEFP VQLMSHSVHE TLMFTQDEIE ELFSLINQPV NSSSPESGSQ GSNRAVYSTC 60 ERKIRRMQSN RESARRSRWR KKRHVENLNN DLNRLKMENR ELKNQLGLTM QYNLILSAEN 120 ERLKSESMSL LATLLDLYRT LEIIISQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp57577_TGAC_v2_mRNA29748 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004498959.1 | 4e-73 | basic leucine zipper 4 | ||||
TrEMBL | A0A2Z6M432 | 1e-85 | A0A2Z6M432_TRISU; Uncharacterized protein | ||||
STRING | XP_004498959.1 | 1e-72 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 1e-15 | basic leucine-zipper 6 |
Link Out ? help Back to Top | |
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Phytozome | Tp57577_TGAC_v2_mRNA29748 |