PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA29561
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 287aa    MW: 30425.1 Da    PI: 7.1685
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA29561genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.35.3e-21190252163
                                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+++++  +++l se+
  Tp57577_TGAC_v2_mRNA29561 190 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENASLRLEVSRIRSDYEQLLSEN 252
                                89**********************************************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.3E-5518157No hitNo description
Gene3DG3DSA:1.20.5.1709.2E-17183249No hitNo description
SMARTSM003382.7E-21190254IPR004827Basic-leucine zipper domain
PfamPF001704.2E-20190252IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.748192255IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-11193249No hitNo description
CDDcd147021.94E-19195245No hitNo description
PROSITE patternPS000360197212IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
GNTPASMETD GKPPEVKEKL PIKRSKGSLG SLNMITGKNN EHGKTTGTSA NGIHSKSGGE  60
SGSFEGTSEG SDANSQNDSQ LKSGDRRDSF EGEPSQNGSS AHTSQNGGLN APHTVVNQSM  120
PVLPISASGA PGAVAGPATN LNIGMDYWGT PTSSNIPALR GKVPSTTVAG GVVTGGSRDS  180
VQSQLWLQDE RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRADVLKEE NASLRLEVSR  240
IRSDYEQLLS ENAALKERLG EQPGSDQHVR NDTQQSGQTE DVQGGH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1206212RRSRLRK
2206213RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA29561
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003612774.20.0bZIP transcription factor 16 isoform X1
SwissprotQ501B24e-97BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2Z6N9B10.0A0A2Z6N9B1_TRISU; Uncharacterized protein
STRINGAES957320.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40173256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-82basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]