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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA29115 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
bZIP |
Protein Properties |
Length: 434aa MW: 47643.5 Da PI: 6.1492 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA29115 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.9 | 2.8e-10 | 343 | 401 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ + l++++
Tp57577_TGAC_v2_mRNA29115 343 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQN 401
9********************************************99988776666665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005829 | Cellular Component | cytosol |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 434 aa
Download sequence Send
to blast |
MGDSEDGNNE MLQRLHSSSA SSFMKQQQLN NHMEQLSIPQ FNSSQMRTVG RNQHHNQRAG 60 MPPSHPHQIP PISPYSQIPV SRTTQMSSHN TSPTPSHTRS LSQPSFFSLD SLPPLSPCSF 120 RESSDNNNNA DVSMEDRDSS PPLIPLRGRE IGKPNSSVVK REFEHSNVEE KKSLSPEGEV 180 VDDLFSAYMN LDNIDAINSS GTDDKNVAVD NNNRDDLDSR ASGTKTNGGG DSSDNEAESS 240 VNESGDSMQR REGMKRSAGG DIAPTSRHYR SVSMDSFIGK LNFNDESFKL PPSPGGLVSP 300 GNSGDGNSAA FSLEFGNGEF SGPELKKIMA NEKLAEIAMA DPKRAKRILA NRQSAARSKE 360 RKMRYISELE HKVQTLQTEA TTLSAQLTLL QRDSVGLTNQ NSELKFRLQS MEQQAKLRDG 420 IFVTLFYLSF LNG*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT053041 | 0.0 | BT053041.1 Medicago truncatula clone MTYFL_FM_FN_FO1G-O-20 unknown mRNA. |