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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA28955 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
ERF |
Protein Properties |
Length: 431aa MW: 46788 Da PI: 8.7604 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA28955 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.2 | 1.4e-20 | 188 | 237 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g
Tp57577_TGAC_v2_mRNA28955 188 RYRGVRQRP-WGKWAAEIRDP-----HkaQRVWLGTFDTAESAARAYDEAALRFRG 237
7********.**********7.....337************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 431 aa
Download sequence Send
to blast |
MSLLTVAHQR GSGEFTGFTV KRDGDNDGGS SSTSQSLNFN QMQSNSSMVY NGDRELTQMV 60 SALTHAASSE SNQMSSNEWI QRSGFPNASS SSSSYSSGSG SGSGFVMTSG SWSGNKRGRD 120 EESSDSNNHF LQQAVPKLFR TVMVPSQGQG QGESSSSVTE EAPTTRTTIA TATSTAASLE 180 DSSQQRRRYR GVRQRPWGKW AAEIRDPHKA QRVWLGTFDT AESAARAYDE AALRFRGSRA 240 KLNFPENVRS IMPPPPQPQQ QPRPQPQSLS QLQSFSAAAV PSRTPQPPVQ GSSDLIRDYL 300 EYSQILQSSG DFQLQQMQQQ QQMQQQEHAS NLVQQWYYNS QLAALQSHSM LSTSSSLSLP 360 SNISPPMATS LPSTQFSTSS SSFPLFSSQQ MGFFRPPENR PHGGGRGGGT EFPPSTWSDT 420 SGHPPPPPYG *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC150978 | 2e-60 | AC150978.15 Medicago truncatula clone mth2-66m17, complete sequence. |