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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA28753 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
ERF |
Protein Properties |
Length: 266aa MW: 28736.8 Da PI: 5.6219 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA28753 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.7 | 2.8e-18 | 49 | 99 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g
Tp57577_TGAC_v2_mRNA28753 49 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 99
59*****998.**********9...336************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
LHLYIMVKTE INKINKEKSK AMQQKTSSSS SSSSSSSSSA RNASNEMKKK YKGVRMRSWG 60 SWVSEIRAPN QKTRIWLGSY STAEAAARAY DAALLCLKGS SASNLNFPLE ISSHFIPQDN 120 TAMSPKSIQR VAASAAAAAA SAVSNNDIAI NTPPLSPPPN HASTTTTTTS SSIVSSPSMS 180 SSPSDQIDDD VSLFSSFGLH SSCGGDYQAN ESMAMMDSWY GFDDLQSPKH VDQMMLNGAL 240 FDFDSTQVLL DDWYEEGDIS LWNFY*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT146757 | 2e-68 | BT146757.1 Medicago truncatula clone JCVI-FLMt-5M3 unknown mRNA. |
GenBank | CR538723 | 2e-68 | CR538723.1 M.truncatula DNA sequence from clone MTH2-27D24 on chromosome 3, complete sequence. |