PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA27221
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 594aa    MW: 66010 Da    PI: 7.7685
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA27221genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.3e-10300330333
                                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 
                                e k  rr+ +NReAAr+sR+RKka++++Le+
  Tp57577_TGAC_v2_mRNA27221 300 EQKTLRRLVQNREAARKSRLRKKAYVQQLEN 330
                                67999************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5174219.27969204IPR005175PPC domain
PfamPF034799.0E-1873183IPR005175PPC domain
Gene3DG3DSA:3.30.1330.806.6E-2073185No hitNo description
CDDcd113781.84E-1573182IPR005175PPC domain
SuperFamilySSF1178563.92E-1873186No hitNo description
SMARTSM003381.3E-4298369IPR004827Basic-leucine zipper domain
PfamPF001704.0E-7299331IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.163300344IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.9E-7302345No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-7304340No hitNo description
PROSITE patternPS000360305320IPR004827Basic-leucine zipper domain
PfamPF141447.9E-27387461IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    Send to blast
MSINHCIKRW RDEARPNKKN KSRNKKVRLI KMNMKTKSLL DHDSKRSQEL QHGSQNNPKN  60
CVIVRKYIPV ADRSHVLEIT TGTDVLKCLF DYIYCRGRGI TILSGNGEVA NVTLRQPTGR  120
IETFMGRFNI MSIFGTIHPP MTPVSEGGLE VFLASTTGQI IGGSVMPPLV ALGPVVLVVV  180
SFANIADGQM EEGDVDLFNG GESTSEMCSV FGAKSNNVAA VASNLQYGTF NNYNFGSASS  240
AMEDNSQKTE DTSTEDNIDI DHKNNQCFSN VSWCNGVGNK ALVDVDSKDQ CNSTKDKTEE  300
QKTLRRLVQN REAARKSRLR KKAYVQQLEN SRLRLAQIEQ ELQQVQQQGV FVANGVAADR  360
GHSVVGNGAL AFDMDYARWV DEHQRLINDI RLAINSQIGD NELHLLVDGA MTHYDELYKL  420
KSIGAKADVF HILSGLWITP AERCFMWLGG FRSSELLKIV TNHLEALTDP QLMAIYNLQH  480
SSQQAEDALS QGMEALQQSL TETLSSTSST ASGNVAEYMG QMAIAMTKLA TLETFIHQVV  540
NIRHADLLRQ QTLQQLNRIL TARQAARALL VINDFILRIR ALNSLWLACP KEY*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA27221
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004497113.10.0transcription factor TGA2.3-like isoform X1
SwissprotQ415581e-137HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2K3NT080.0A0A2K3NT08_TRIPR; Transcription factor HBP-1b(C1)
STRINGXP_004497113.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60223149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-110bZIP family protein