![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA27221 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
bZIP |
Protein Properties |
Length: 594aa MW: 66010 Da PI: 7.7685 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA27221 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Tpr&pid=Tp57577_TGAC_v2_mRNA27221) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.4 | 4.3e-10 | 300 | 330 | 3 | 33 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33
e k rr+ +NReAAr+sR+RKka++++Le+
Tp57577_TGAC_v2_mRNA27221 300 EQKTLRRLVQNREAARKSRLRKKAYVQQLEN 330
67999************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 594 aa
Download sequence Send
to blast |
MSINHCIKRW RDEARPNKKN KSRNKKVRLI KMNMKTKSLL DHDSKRSQEL QHGSQNNPKN 60 CVIVRKYIPV ADRSHVLEIT TGTDVLKCLF DYIYCRGRGI TILSGNGEVA NVTLRQPTGR 120 IETFMGRFNI MSIFGTIHPP MTPVSEGGLE VFLASTTGQI IGGSVMPPLV ALGPVVLVVV 180 SFANIADGQM EEGDVDLFNG GESTSEMCSV FGAKSNNVAA VASNLQYGTF NNYNFGSASS 240 AMEDNSQKTE DTSTEDNIDI DHKNNQCFSN VSWCNGVGNK ALVDVDSKDQ CNSTKDKTEE 300 QKTLRRLVQN REAARKSRLR KKAYVQQLEN SRLRLAQIEQ ELQQVQQQGV FVANGVAADR 360 GHSVVGNGAL AFDMDYARWV DEHQRLINDI RLAINSQIGD NELHLLVDGA MTHYDELYKL 420 KSIGAKADVF HILSGLWITP AERCFMWLGG FRSSELLKIV TNHLEALTDP QLMAIYNLQH 480 SSQQAEDALS QGMEALQQSL TETLSSTSST ASGNVAEYMG QMAIAMTKLA TLETFIHQVV 540 NIRHADLLRQ QTLQQLNRIL TARQAARALL VINDFILRIR ALNSLWLACP KEY*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |