PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA27146
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 295aa    MW: 33566.2 Da    PI: 9.0472
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA27146genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.31.2e-061471872262
                                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1  22 qRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                                +RK +e+ eLee v+ L+++N++L  +l  ++ e ++ ks+
  Tp57577_TGAC_v2_mRNA27146 147 ARKAQELTELEELVEDLKSQNETLVGRLHAYNSEQKEKKSS 187
                                5*******************************999998886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MDKIRAFSSP QLNSSSTSNN PDEIGMEGLA TNVRLLLKLI QDHNGATTKD NDERKFHRMN  60
GMMSLLDEVR TRVQKVQTST KKRAELRRCN TDLRPNIPKD KRAPDVPTDE KDRLKKELNA  120
SLVARQSLQA MCSSLGKEKQ IMASELARKA QELTELEELV EDLKSQNETL VGRLHAYNSE  180
QKEKKSSSGV EMEGNIVLQE RNKALSEQLQ KSIDGYRSLK RKLKDMHEEK KEMHATMEQM  240
GLEVQSGIDR IHSFKEQMET TNLEISDVGK EISVLEQMLE SLSMKISKHT QKKT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA27146
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013462657.10.0uncharacterized protein LOC25486046 isoform X2
TrEMBLA0A2K3P1M80.0A0A2K3P1M8_TRIPR; Myosin heavy chain-like protein
STRINGXP_004485989.11e-177(Cicer arietinum)