|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Tp57577_TGAC_v2_mRNA26394 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
|
Family |
bZIP |
Protein Properties |
Length: 339aa MW: 39720 Da PI: 7.7318 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA26394 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 23.3 | 1.4e-07 | 203 | 252 | 14 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
R +A+ +R+RK ++i eLe+ +++L+ae + ele l ++ l +e+
Tp57577_TGAC_v2_mRNA26394 203 RHSAQQYRARKVQYIGELERSIQALQAEGYEVSAELEFLDQQNLILGMEN 252
89****************************99999999999887777766 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MLLSYPHLIS FSQYSFPLYK MRIIQLAITN HMEISNSSQN MRNYSQEHAS LPPKISKYEI 60 SESCLEGLMS QLGKECGPRR YHRTYSDSML ASEQQHQQQQ QQQQQEVPYW LKDLLDDDDD 120 DNDEPEESEE KLQPSTNNAC SNSSKAHRRS SSDSLAYLNN KTILQYSPER KEQNNMYLLA 180 ADQQPSFLHQ NHPRTDHSKR GKRHSAQQYR ARKVQYIGEL ERSIQALQAE GYEVSAELEF 240 LDQQNLILGM ENRALKQRLD SLSQEHFVKC LEQEVLEREI TRLRNLYQQQ QHKQQQQQQQ 300 QQQKHHGRNR SKQRQDLESS IAKLSLKNKG TESSQKAR*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC125481 | 2e-60 | AC125481.23 Medicago truncatula clone mth2-15n13, complete sequence. |