 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp57577_TGAC_v2_mRNA26112 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
|
| Family |
CAMTA |
| Protein Properties |
Length: 271aa MW: 30238.6 Da PI: 6.5838 |
| Description |
CAMTA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA26112 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | CG-1 | 180.4 | 2.1e-56 | 22 | 135 | 4 | 118 |
CG-1 4 ekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYah 87
++rwl++ ei++iL n++ +++t+e++ rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v++l+cyYah
Tp57577_TGAC_v2_mRNA26112 22 AQHRWLRPAEICEILRNYRLFHITSEPHIRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDALHCYYAH 105
49********************************************************************************** PP
CG-1 88 seenptfqrrcywlLeeelekivlvhylevk 118
+een++fqrr+ywlLe++ ++iv+vhylevk
Tp57577_TGAC_v2_mRNA26112 106 GEENENFQRRSYWLLEQD-THIVFVHYLEVK 135
******************.*********985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MAERPSYGLG PRLDIQQLQF EAQHRWLRPA EICEILRNYR LFHITSEPHI RPPSGSLFLF 60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDALH CYYAHGEENE NFQRRSYWLL 120
EQDTHIVFVH YLEVKGNKSN IGGSADSDGV ISDSQKVNSP SSGFPTTYSS VPSLSTDSMS 180
PTSSLASLRE DADSGDHGQS SVSGTDYIPL FDRDKFSGND GNCIDGPKAH GLASWDTVLQ 240
CTAELNADPS LVSIPSFPXX XXXXXXVGRD *
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in freezing tolerance in association with CAMTA1 and CAMTA3. Contributes together with CAMTA1 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved together with CAMTA3 and CAMTA4 in the positive regulation of a general stress response (PubMed:25039701). Involved in tolerance to aluminum. Binds to the promoter of ALMT1 transporter and contributes to the positive regulation of aluminum-induced expression of ALMT1 (PubMed:25627216). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25627216, ECO:0000305|PubMed:11925432}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By salt, wounding, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by aluminum (PubMed:25627216). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:25627216}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC187465 | 2e-59 | AC187465.3 Medicago truncatula chromosome 2 BAC clone mth2-69g14, complete sequence. |
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT5G64220.2 | 2e-82 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
