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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Tp57577_TGAC_v2_mRNA25463 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
FAR1 |
| Protein Properties |
Length: 355aa MW: 40523.5 Da PI: 7.7301 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA25463 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 61 | 3.7e-19 | 49 | 143 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevt 79
+fY +Y+k GFsvrks kk+ + + it++ fvCs++g r++++ + +++r++r t t+C+a+++v+ + +g+++v+
Tp57577_TGAC_v2_mRNA25463 49 EFYYQYGKCKGFSVRKSDDKKKigpDGCKIITNKLFVCSRQGLRDKRHISrLDRKREHRRLTCTKCTARFRVTYKAdKGRFVVS 132
6********************9988788899**************999875789999****************9999******* PP
FAR1 80 kleleHnHela 90
+e+ HnHel+
Tp57577_TGAC_v2_mRNA25463 133 VFEETHNHELT 143
*********97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
DGDDDDDDDG NDHDFDVEAS IGERAVRINS MTADEIRGMD FGSVDEAYEF YYQYGKCKGF 60
SVRKSDDKKK IGPDGCKIIT NKLFVCSRQG LRDKRHISRL DRKREHRRLT CTKCTARFRV 120
TYKADKGRFV VSVFEETHNH ELTSARYVHL HPVYRKISEA DRAQVDGMQS RGIRTCHIMG 180
YMVAQKGGYG DVGFTKKDLY NYFDKKMRDI VKDGDVAASL HYLNAKSTTD PMLYAEYAAD 240
SSNGRMKSLF WADGTSRSDY FCFGDVVAFD TTYKKNKYNL PLVIFSGCNH HSQTIIFGAA 300
LVSDETTETY KWVLNCFLEC MENKRPKAVV TDGDRAMREA IKEVFPDSTH RLYA*
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