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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp57577_TGAC_v2_mRNA25023 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
ERF |
| Protein Properties |
Length: 175aa MW: 19962.4 Da PI: 9.3957 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA25023 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 55.7 | 1.2e-17 | 45 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g
Tp57577_TGAC_v2_mRNA25023 45 PYRGIRKRK-WGKWVAEIREP---NKRSRIWLGSYTTPVAAARAYDTAVFYLRG 94
69****999.**********9...336*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009409 | Biological Process | response to cold |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0001078 | Molecular Function | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 175 aa
Download sequence Send
to blast |
MLNLKERAEP IMEEVRDCCS TIIRNRGSKN NNPQEKHHKQ KQEKPYRGIR KRKWGKWVAE 60
IREPNKRSRI WLGSYTTPVA AARAYDTAVF YLRGPTARLN FPELLFQDDD EHNDDGSIQQ 120
GNMSADLIRK KATKVGARVD ALQTALQASS ISTSAQFNSD VKPDLNEFPE PEDY*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC122728 | 1e-150 | AC122728.32 Medicago truncatula clone mth2-22l4, complete sequence. |
| GenBank | BT147525 | 1e-150 | BT147525.1 Medicago truncatula clone JCVI-FLMt-6F9 unknown mRNA. |
