 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp57577_TGAC_v2_mRNA24487 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
|
| Family |
FAR1 |
| Protein Properties |
Length: 179aa MW: 19859.5 Da PI: 8.5671 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA24487 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 54.8 | 3.1e-17 | 65 | 149 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85
+Y +YA+++GF ++k +sk+ ++g + t+ Cs+ gk ++ k+ ++++ t+t+Cka+l+ +dg+ +v+++ leH
Tp57577_TGAC_v2_mRNA24487 65 YYMNYARHMGFGISKISSKNG-DDG-KKYFTLACSRAGKYVSNPKN---VLKPNPITKTQCKARLNACICSDGTVVVSSVILEH 143
8*************9998877.444.6889************9999...899******************************** PP
FAR1 86 nHelap 91
nHel+p
Tp57577_TGAC_v2_mRNA24487 144 NHELSP 149
****86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 179 aa
Download sequence Send
to blast |
LSPSIVASYS LLKLSVQEIS KSPSREGENK ESEIYDDKLD SNIVCEEEAP RTAMTFSSEE 60
EVTLYYMNYA RHMGFGISKI SSKNGDDGKK YFTLACSRAG KYVSNPKNVL KPNPITKTQC 120
KARLNACICS DGTVVVSSVI LEHNHELSPT KARYFRCNKN LGSHIKRRLE LNDQAGIN*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CT963108 | 2e-73 | CT963108.2 Medicago truncatula chromosome 5 clone mth4-37c5, COMPLETE SEQUENCE. |
