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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA24308 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
NAC |
Protein Properties |
Length: 495aa MW: 55580.2 Da PI: 7.1803 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA24308 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 114.7 | 9.7e-36 | 47 | 194 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr 76
lp+G++F+Ptd+el+ e+L++kve+k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r
Tp57577_TGAC_v2_mRNA24308 47 LPAGVKFDPTDQELI-EHLEAKVESKNMKSHPlidefilTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRR 128
799************.99*********5553344444434777756**********.555666799****************** PP
NAM 77 a.............tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+ + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l
Tp57577_TGAC_v2_mRNA24308 129 KiqteecdlqgtssGGETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 194
8789999988854433567************.999***********5547999999*********98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 495 aa
Download sequence Send
to blast |
MMNNKMSNVS SSDLIDSKLE EHQSCGSKHC PRCGHKFDQG KPDWLGLPAG VKFDPTDQEL 60 IEHLEAKVES KNMKSHPLID EFILTIEGED GICYTHPEKL PGVTRDGLSR HFFHRPSKAY 120 TTGTRKRRKI QTEECDLQGT SSGGETRWHK TGKTRPVMVN GKQKGCKKIL VLYTNFGKNR 180 KPEKTNWVMH QYHLGQHEEE KEGELVVSKI FYQTQPRQCN WSDNNNNHRI GATIATTGEG 240 SGGGEASNNY GRRDSGSGSS SSKEIVTHNH SHGGHIHRDE MSAVVGVNPL TSFTNAALDI 300 QHLKSDHFGF LPFRKSTFDE VGIGEGSSAR EMQASGGSCD QEQQQQHVVV HHHQQHQQQH 360 QHQHHQQHEI HAHQQINANT AFHISRPSNP ISTIISPPPL HHTTSIILDD NSYHVSTIML 420 QQNENFQQHQ QQHHKLGGGR SASGLEEVIM GCTSTSSDTI KEESSIRNQQ EAEWLKYSSY 480 WPVDPHDNPN HHHG*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC162439 | 0.0 | AC162439.20 Medicago truncatula clone mth2-175g14, complete sequence. |