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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA23943 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
NAC |
Protein Properties |
Length: 525aa MW: 59451.2 Da PI: 4.4951 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA23943 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 167 | 6.4e-52 | 20 | 146 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyW 83
+pGfrFhPtdeelv++yLk+k+ gkkl++ +vi e+d+yk++P+dLp + +k+++++w+fF++rd+ky++g r+nrat++gyW
Tp57577_TGAC_v2_mRNA23943 20 MPGFRFHPTDEELVMYYLKRKICGKKLKF-NVICETDVYKWDPEDLPdQsFLKTGDRQWFFFCHRDRKYPNGGRSNRATRHGYW 102
69**************************9.99**************96347788999*************************** PP
NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
katgkd++v+ +++ vg+kktLvfy grap+ge+tdWvmhey++
Tp57577_TGAC_v2_mRNA23943 103 KATGKDRNVIF-NSRSVGVKKTLVFYFGRAPSGERTDWVMHEYTM 146
***********.999****************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0070301 | Biological Process | cellular response to hydrogen peroxide |
GO:0005634 | Cellular Component | nucleus |
GO:0005789 | Cellular Component | endoplasmic reticulum membrane |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 525 aa
Download sequence Send
to blast |
MGAVSESASA DAFSEVMSSM PGFRFHPTDE ELVMYYLKRK ICGKKLKFNV ICETDVYKWD 60 PEDLPDQSFL KTGDRQWFFF CHRDRKYPNG GRSNRATRHG YWKATGKDRN VIFNSRSVGV 120 KKTLVFYFGR APSGERTDWV MHEYTMDEEE LKRCHDVKEY YALYKVFKKS GPGPKNGEQY 180 GAPFKEEDWA DDNVVDFNVK AAQLEAPKAV LNPFTDQPQQ LAVVNPFTDQ QQPLFVDEID 240 EFFNGAFDIE PVLDQQQFNG YVDFPQVCDL QQSVVMGQFS EAMIFSEASG KLQSSGQHYD 300 AQFDFDFNHS ATSHLSEAPE VTSAPNIQSD EGLVFYEDGF LEINDLTEFE DGLSEFELYQ 360 DAEMFLGTAE ANQNVDEFWM HIERNTRSQT EDYTGSFSQT NPGVVCDSVS FPTESTENQR 420 STVEDVTTTS RFSSALWAFV DSIPTTPASA AENPLVNRAL NRMSSFSRVK INPTNIAAGI 480 ETTTMKRPGR KGFSFLFFPI LIALCAFLWI SIGNLRLLGR CISP*
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