PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA2273
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family EIL
Protein Properties Length: 476aa    MW: 55367.7 Da    PI: 5.0815
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA2273genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3379.55.4e-116393671353
                               XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                      EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpve 85 
                               +elkkrmwkd++ll++lke+ k+        +++++++   e++rrkkmsraQD+iLkYM+k+m  c+aqGfvYgiipe+gkpv+
  Tp57577_TGAC_v2_mRNA2273  39 DELKKRMWKDKILLQKLKEKGKK--------VDQQNQQAKDEASRRKKMSRAQDSILKYMMKIMTTCKAQGFVYGIIPENGKPVT 115
                               79*************99998886........3445556679******************************************** PP

                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT-- CS
                      EIN3  86 gasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqt..ersseshslselqDTtlgSLLsalmqhcdppqrrfplekgv 168
                               g+s+sLr+WWke+v+f +n+p  +sky +  l  +++++l+     ss+   l +lqDTtlgSL salmqhc ppqrrfple+g+
  Tp57577_TGAC_v2_mRNA2273 116 GSSESLREWWKEQVKFSQNAPLEVSKYLP--LFEENQEELELldPISSYMYLLYDLQDTTLGSLISALMQHCAPPQRRFPLERGL 198
                               ***************************33..333344443321147899999********************************* PP

                               HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTT CS
                      EIN3 169 epPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnq 252
                               +pPWWP+G+e+wwg++g l+++qg+ppykkphdlkkawkvsvL+a ikh+sp+++++r+l+ qsk lqdkm+ak+s+++++v+nq
  Tp57577_TGAC_v2_mRNA2273 199 APPWWPNGTEQWWGQQGlLAQKQGPPPYKKPHDLKKAWKVSVLAAIIKHLSPDVDKVRRLVTQSKTLQDKMTAKDSATWSKVMNQ 283
                               *****************9999999************************************************************* PP

                               TTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX. CS
                      EIN3 253 eekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgs 337
                               e+++++            ++ +++s+e     eg++ s +khv ++ + +++  ++kr+ k++ +  v   +  + cq +++++s
  Tp57577_TGAC_v2_mRNA2273 284 EQALVH-----L-----TEKCLKISEE-----EGESSSATKHVLNQLE-EEYGSNEKRR-KFDFDVDVDFDKLLYSCQYAECPQS 351
                               *99772.....1.....3334444444.....5666777777766655.4566666665.8999999999999************ PP

                               XXXXXXXXXXXXXXXX CS
                      EIN3 338 etelifadknsisqne 353
                               e  ++f+dk+s+ ++e
  Tp57577_TGAC_v2_mRNA2273 352 ELCMGFSDKSSRLNHE 367
                               ************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.0E-10939284No hitNo description
Gene3DG3DSA:1.10.3180.102.7E-66160290IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.48E-57163288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
LHCIYKKNSQ KSIMVKITEE IDLFDQQEEE KLEEVIDYDE LKKRMWKDKI LLQKLKEKGK  60
KVDQQNQQAK DEASRRKKMS RAQDSILKYM MKIMTTCKAQ GFVYGIIPEN GKPVTGSSES  120
LREWWKEQVK FSQNAPLEVS KYLPLFEENQ EELELLDPIS SYMYLLYDLQ DTTLGSLISA  180
LMQHCAPPQR RFPLERGLAP PWWPNGTEQW WGQQGLLAQK QGPPPYKKPH DLKKAWKVSV  240
LAAIIKHLSP DVDKVRRLVT QSKTLQDKMT AKDSATWSKV MNQEQALVHL TEKCLKISEE  300
EGESSSATKH VLNQLEEEYG SNEKRRKFDF DVDVDFDKLL YSCQYAECPQ SELCMGFSDK  360
SSRLNHESLC SYRIEQGHVP FHDYLPDDWL NMHIAGANNQ HQDRKNLVEN VKELREIVDM  420
TVEEDYGGFW LNSMQDLELN MGVDMERDNV DLNQNPAQDT TLSHEETSIW DLTYD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A3e-581612881127Protein ETHYLENE INSENSITIVE 3
4zds_B3e-581612881127Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1322327EKRRKF
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA2273
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU4439660.0GU443966.1 Trifolium repens clone BAC 113f04 bristled-like protein, ethylene insensitive-like protein, bZIP transcription factor, acyl-coA oxidase, and dehydration responsive element binding protein genes, complete cds; and unknown gene.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003630065.20.0putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLD3YBE30.0D3YBE3_TRIRP; Ethylene insensitive-like protein
STRINGAET045410.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-126EIL family protein