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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA21780 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
bZIP |
Protein Properties |
Length: 361aa MW: 41092.7 Da PI: 6.7938 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA21780 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 37.6 | 4.8e-12 | 78 | 116 | 4 | 42 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42
+k +rr+++NReAAr+sR+RKka++++Le +L +
Tp57577_TGAC_v2_mRNA21780 78 DKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLVQLE 116
6889*************************8665555544 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MNSPSAQFVS SRRMSVYDPI HQINMWGEGF KSNGNLSASI PLIDEVDLKF DSSQSEDASH 60 GILGTSNKYD QEASRPIDKI QRRLAQNREA ARKSRLRKKA YVQQLESSRL KLVQLEQELE 120 RVRQQGMYMN GGLDSNNMCF AGPMNSAFEM EYGHWVDEQN RQISEMRNAL NSHISDIELR 180 ILVDGMMNHY AENYRMKSAA AKADVFYVMS GMWKTTAERF FLWIGGFRPS ELLKILGPMI 240 EPLTEQQRLD IDNLGQSCQQ AEDALSQGME KLRQTLADSV AAGQFIEGTY IPQMATAMEK 300 LEALVCFVNQ ADHLRQETLQ QMSRILTIRQ SARCLLALGE YFQRLRALSS LWSNRPREPA 360 *
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Herrera-Vásquez A, et al.
Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis. Plant Mol. Biol. Rep., 2018. [PMID:26696694] - Gutsche N,Zachgo S
The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] - Sun T, et al.
TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g). New Phytol., 2018. 217(1): p. 344-354 [PMID:28898429]
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