PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp57577_TGAC_v2_mRNA21585 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 52aa MW: 6205.1 Da PI: 4.0229 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 42.2 | 2.6e-13 | 7 | 52 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 lp+G+ F+Ptde+l+ +yLk+k++++k+++ + + ++d++++ePwd+p Tp57577_TGAC_v2_mRNA21585 7 LPRGVIFKPTDEQLIEHYLKNKIASEKMDF-D-FIDLDLNEIEPWDIP 52 799************************999.5.5689*********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.41E-12 | 4 | 52 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 15.707 | 7 | 52 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.2E-6 | 8 | 49 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 52 aa Download sequence Send to blast |
MNDFLPLPRG VIFKPTDEQL IEHYLKNKIA SEKMDFDFID LDLNEIEPWD IP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp57577_TGAC_v2_mRNA21585 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2K3MBD8 | 4e-28 | A0A2K3MBD8_TRIPR; NAC domain-containing protein (Fragment) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 8e-15 | NAC 007 |
Link Out ? help Back to Top | |
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Phytozome | Tp57577_TGAC_v2_mRNA21585 |