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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Tp57577_TGAC_v2_mRNA2122 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
TCP |
Protein Properties |
Length: 467aa MW: 49727.8 Da PI: 7.0957 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA2122 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 134.3 | 1.1e-41 | 123 | 231 | 3 | 89 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86
+ k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+s+ s
Tp57577_TGAC_v2_mRNA2122 123 PPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSTLS 207
5699****************************************************************99988888888888444 PP
TCP 87 sg.....................k 89
++ +
Tp57577_TGAC_v2_mRNA2122 208 APpsksaphsfhsalalahhpyeE 231
444444444444444444444321 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 467 aa
Download sequence Send
to blast |
MELSSDLQQN NNKKQQKRGT TTHPHHQQQE SLSPPPSNSH SQQHQQHHLV VPFDGRPSPF 60 IMGSISTNNT NSSPSNSSSS SASASAIDAS LAIATRSEPH SNNNNQIQQF SSSTTTAVAV 120 ANPPKRSTKD RHTKVDGRGR RIRMPATCAA RVFQLTRELG HKSDGETIEW LLQQAEPAII 180 AATGTGTIPA NFSTLNVSLR SSGSTLSAPP SKSAPHSFHS ALALAHHPYE EAAYQHAPLL 240 GFHPHQQLMN ADQIGEALSN ENYMRKRYRE DLFKDDNNNQ NNETGDADGS SSPKGFKXXX 300 XXXXXXXXXX XXXXNNETGD GDGSSSPKGF KTNHQQDGTM GEQGEGGGGG ASSSSSSASS 360 AGNSISGLLR PPSNMLPATA MWATAGSGNT IWMVPVTGGG GATANSETVQ TQNMWPFSTH 420 LNNQQSSQQQ GTPSSQLHFM PRFNVPTGNS GGSDGVEFEA YWIGSV*
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