 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp57577_TGAC_v2_mRNA18819 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
|
| Family |
WOX |
| Protein Properties |
Length: 187aa MW: 20830 Da PI: 10.2364 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA18819 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 62.7 | 5.6e-20 | 30 | 91 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+t+t++q+++L++l++ r psae++++++++l +++ ++V++WFqN++a+e++
Tp57577_TGAC_v2_mRNA18819 30 STRWTPTTDQIRILKDLYYTngIRSPSAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 91
58*****************7457*************************************97 PP
|
| 2 | Wus_type_Homeobox | 114.9 | 4e-37 | 29 | 93 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
Tp57577_TGAC_v2_mRNA18819 29 SSTRWTPTTDQIRILKDLYYtNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 93
789***************9989*****************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 187 aa
Download sequence Send
to blast |
MEQPQQQNQN EEAGGGGSSG KGGYMSRQSS TRWTPTTDQI RILKDLYYTN GIRSPSAEQI 60
QRISARLRQY GKIEGKNVFY WFQNHKARER QKKRFTSDVN NVVLPTIQRS TPNNNVISSA 120
NWKVPDHDHQ QQHVNVLTNH SNHNISSSGL STASCSSAEM ATLGQIGNYG YGTVPMEKSF 180
RVSLGL*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). May induce shoot stem cells activity in order to maintain the stem cell identity (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ477681 | 1e-136 | FJ477681.1 Medicago truncatula WUSCHEL (WUS) mRNA, complete cds. |
