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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Tp57577_TGAC_v2_mRNA18219 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
|
| Family |
TCP |
| Protein Properties |
Length: 295aa MW: 31951.6 Da PI: 9.1255 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA18219 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 27 | 1.4e-08 | 81 | 138 | 48 | 101 |
TCP 48 ieWLlqqakpaikeltgtssssasec...........eaesssssasnsssgkaaksaakskksq 101
i WLl+ a+pai+++tgt++ +a ++ + s++++++++++++++kk++
Tp57577_TGAC_v2_mRNA18219 81 IRWLLEHAEPAIIAATGTGTVPAIAMsvngtlkipttS-------PSKEQEPQQSEDSPEKKKRK 138
99****************77777333322212211111.......11111112222222111111 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MSNEASRNID LTLGDPKEEP ETEDGSAMPV AMQMNQAQAQ VQAQAQAQAQ QQPLQKRAST 60
KDRHTKVEGR GRRIXXXXXX IRWLLEHAEP AIIAATGTGT VPAIAMSVNG TLKIPTTSPS 120
KEQEPQQSED SPEKKKRKRP SNSAYVDIND SVSVSAGLIT TSNINQNLTA TAIIPQQTAI 180
PLPQNMVPVW AIPSNAVVSG GNAFFMVPTN QPQFFTLARP ITGFVSSMVR PVIQLQQQAS 240
TSSNTCTTSP LMKSPATATV MAPSTAATTT TQMLRDFSLE IYDRQELQLL RERN*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 132 | 139 | EKKKRKRP |
