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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA15436 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
bZIP |
Protein Properties |
Length: 332aa MW: 37912.8 Da PI: 5.3 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA15436 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34 | 6.4e-11 | 199 | 246 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52
kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L ++ l
Tp57577_TGAC_v2_mRNA15436 199 KRVKRILANRQSAQRSRVRKLQYISELERSVSSLQAEVSVLSPRVAYL 246
899**********************************98887666555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MAQLPPKVPI PNMTPTWPEF SSHQKLPTLK TLLSPNASNF QNNQQNPSWV DEFLDFSSAR 60 RGVHRRSASD SVTFIETSMM EHCRRRDGDN EFERFDDEQL MSMFCVDEVS GKNMMPPPSA 120 TAALSSNSNP STPSDHNSIN DDKEEEEDEE KQQQLKHEFD EDEISEGKQE TARIVNDDDD 180 DDNNANRTNF SSQKITDPKR VKRILANRQS AQRSRVRKLQ YISELERSVS SLQAEVSVLS 240 PRVAYLDHQR LLLNVDNSAL KQRIAALAQD KIFKDAHQEA LKREIERLRQ VYHQQNNIKN 300 NNNATVVSPS PSPKPHCDND THIENEHLIN V*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC140034 | 1e-133 | AC140034.14 Medicago truncatula clone mth2-17g19, complete sequence. |
GenBank | AC171619 | 1e-133 | AC171619.9 Medicago truncatula clone mth2-160a1, complete sequence. |