![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA1366 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
bZIP |
Protein Properties |
Length: 268aa MW: 29336.3 Da PI: 6.72 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA1366 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Tpr&pid=Tp57577_TGAC_v2_mRNA1366) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 47.9 | 2.9e-15 | 92 | 144 | 3 | 55 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55
++kr rrk +NRe+ArrsRqRK a + eLe v++L+ eN +L k+ +++
Tp57577_TGAC_v2_mRNA1366 92 DIKRLRRKVSNRESARRSRQRKHAHLSELESQVEKLKLENATLYKQFTDTSQQ 144
58*****************************************9776665555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0071333 | Biological Process | cellular response to glucose stimulus |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MLPLMIELQD AVTSFSTCGG LTDSQNFTPK HSTITATIDS QSSIYGTVGS PVSANKPNSR 60 ENHTKGTTSG SSDPSDEDDE LGPCEQSTNP LDIKRLRRKV SNRESARRSR QRKHAHLSEL 120 ESQVEKLKLE NATLYKQFTD TSQQFHEADT NNRVLKSDVE ALRAKVKLAE DMVTRSSFTT 180 SLNNQFFHNQ YQSSTPPQLN ATNIRRMPHV SPTINVQQGN GASYGGVAVG EHNSNFVGFG 240 NLDMSNFNDA VDNGVLSNAL SCVTIWP*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}. |
Publications
? help Back to Top |
- Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif. J. Biol. Chem., 2001. 276(17): p. 14139-52 [PMID:11133985] - Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]
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