PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA12595
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family EIL
Protein Properties Length: 836aa    MW: 92532.5 Da    PI: 6.0165
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA12595genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3298.91.7e-91404151348
                                XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXX........XXXXXXXXXXXXXXXXXXX CS
                       EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiL........kYMlkemevcnaqGfvYgi 76 
                                ee+++   k +  l+ lk ++++   +k++  +  + ++ + + +rk+m raQDg+L        +Y lk+me c a+GfvYgi
  Tp57577_TGAC_v2_mRNA12595  40 EEVEEMICKHKKHLRMLKYKRRRGECSKSTRNSLDQLEQLKLKLNRKTMFRAQDGVLsiltrrvgRYILKMMESCDARGFVYGI 123
                                78999999999999999988888666777778888888******************9888888888****************** PP

                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TT CS
                       EIN3  77 ipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqr 160
                                + + gk+ +g+s+sLraWWke+v+fd+n+  ai ky+ kn  +  +  l+  ++ ++ sl e+ DT l+S+Ls+l+q c+ppqr
  Tp57577_TGAC_v2_mRNA12595 124 VLKDGKTISGSSESLRAWWKEEVRFDKNASLAILKYDEKNGNSLVNGMLNG-KKITPYSLYEIADTKLSSILSSLIQQCQPPQR 206
                                ************************************777655444444444.899***************************** PP

                                S--TTT--HHHH---S--HHHHHHT--TT--...-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHH CS
                       EIN3 161 rfplekgvepPWWPtGkelwwgelglskdqg..tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsake 242
                                 +plekg++pPWWPtGke ww+e g+ kdq   +ppykkphdlkk wkv vL avikh+sp++++i++ +r+s+ lqdk +a e
  Tp57577_TGAC_v2_mRNA12595 207 YYPLEKGIPPPWWPTGKESWWSEIGVGKDQVpdAPPYKKPHDLKKIWKVCVLIAVIKHLSPNLKKIKDTVRRSRTLQDKLTANE 290
                                *******************************99*************************************************** PP

                                HHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX......................XX CS
                       EIN3 243 sfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavktta......................gf 304
                                + ++++v+ +ee+++++++++    +++s+ v  +  ++++ve+++ ++ ++  ++                          + 
  Tp57577_TGAC_v2_mRNA12595 291 TSIWAAVIDNEERIAREMYPDFFANETSSQCVDRRGANSKRVEKTSLPHGSAFVER---GgewnqvqpnfngvdvapmnnlvE- 370
                                *********************65545566666666666666663333333322222...123345556667778888887743. PP

                                XXXXXXX.XXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXX CS
                       EIN3 305 pvvrkrk.kkpsesakvsskevsrtcqssqfrgsetelifadkns 348
                                +  +krk  + +es+++ +++  +tc + q++++++ + +++ ++
  Tp57577_TGAC_v2_mRNA12595 371 NGGNKRKvDELVESTITTKNNEGYTCINPQLQYHNQGVDVNNSSH 415
                                334444415778888888888999999999999999888887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.9E-9040302No hitNo description
Gene3DG3DSA:1.10.3180.101.4E-57176311IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167686.28E-50180305IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 836 aa     Download sequence    Send to blast
MDPKGRSFVT GPSKGGASNN AKEKGKEKEE GSEEKDLSIE EVEEMICKHK KHLRMLKYKR  60
RRGECSKSTR NSLDQLEQLK LKLNRKTMFR AQDGVLSILT RRVGRYILKM MESCDARGFV  120
YGIVLKDGKT ISGSSESLRA WWKEEVRFDK NASLAILKYD EKNGNSLVNG MLNGKKITPY  180
SLYEIADTKL SSILSSLIQQ CQPPQRYYPL EKGIPPPWWP TGKESWWSEI GVGKDQVPDA  240
PPYKKPHDLK KIWKVCVLIA VIKHLSPNLK KIKDTVRRSR TLQDKLTANE TSIWAAVIDN  300
EERIAREMYP DFFANETSSQ CVDRRGANSK RVEKTSLPHG SAFVERGGEW NQVQPNFNGV  360
DVAPMNNLVE NGGNKRKVDE LVESTITTKN NEGYTCINPQ LQYHNQGVDV NNSSHSNFSI  420
IPPYEVANKR KCEVGNGMRY SSDHYEIYSL QDDMNVRNNH HLASIIGGSS SNSINNNNNQ  480
FQMVDVGAKT HQHVAPLLDQ HVQVALPVAA NHTGNYSGGG GGKEVNSDFM DTHNSGNYSG  540
GGGVGGGGEV NYDFTDTFNS GNYSGGAGEV NSDFIDTHNS GNYSGGGGEV NSDFINTYNS  600
GNYSRGRGGG EVNSNLIDMY TSDSIHPLKK NLLIQSQFDN HAGNYSGGGG VDSDLMDMYN  660
SGILPENNTT MNHVVPVGNM TPTPGINQNF EPPIYPASDQ ENNTIMSDMI TPTPGVNPNM  720
QPQIYTSSDS MMATSMPVMN MAQTSGFNQN MQPQMDKNFY GEQEVGNSSY NYEVSNADVE  780
ANVPMHGNVS TTTIDDLRAF NSLSDVDAYN NYAFGSSSFE ETPSYDFSWF YNKEN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A6e-571783112133Protein ETHYLENE INSENSITIVE 3
4zds_B6e-571783112133Protein ETHYLENE INSENSITIVE 3
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA12595
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K3LB310.0A0A2K3LB31_TRIPR; Ethylene insensitive 3-like protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.18e-80EIL family protein