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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA10979 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
bZIP |
Protein Properties |
Length: 279aa MW: 30778.8 Da PI: 4.3875 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA10979 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 38.5 | 2.6e-12 | 145 | 189 | 3 | 47 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
+k+++r ++NR AA +sR+RKk ++++Le+k+ +e+e ++L
Tp57577_TGAC_v2_mRNA10979 145 VSKKQIRQMRNRDAAVKSRERKKTYVKNLETKSRYFEGECRRLEH 189
579************************************987753 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0030968 | Biological Process | endoplasmic reticulum unfolded protein response |
GO:0005634 | Cellular Component | nucleus |
GO:0005789 | Cellular Component | endoplasmic reticulum membrane |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MTIFKQKICC SVSSKVGVGV GGGEHMVNES TNLPDFEQVA DFLQEDVINP PVSIGDTPSP 60 IPALSQIENL LMTDSDEGIA SPEESDYDKL LAEILIEPLP ESEEGSVSVV PSDKGGVDPS 120 TPEEVRSDKD GVDPSTPEEV SPEPVSKKQI RQMRNRDAAV KSRERKKTYV KNLETKSRYF 180 EGECRRLEHL LQCCYAENHA LRFCLQSRSA FGAPMTMQES AVLLLESLLL GSLLWFMGIM 240 WQLTPSTINF QHVDRITTEA PREEPSPSFT CLAPKTCE*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT138826 | 1e-100 | BT138826.1 Lotus japonicus clone JCVI-FLLj-17J20 unknown mRNA. |