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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp3g16720 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family |
M-type_MADS |
Protein Properties |
Length: 375aa MW: 42683 Da PI: 9.9932 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp3g16720 | genome | thellungiella | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 69.5 | 3e-22 | 31 | 75 | 6 | 50 |
HHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 6 ksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+s + ++++kR+++++KKA+ELS+LC+++v+vi+++s+g+l +++
Tp3g16720 31 SSLKAISLTKRQETVFKKAYELSTLCGIDVCVIYYGSDGELNTWP 75
677899**************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MASSSSSSFP SSTKKPTKVS QIRQTLFKKP SSLKAISLTK RQETVFKKAY ELSTLCGIDV 60 CVIYYGSDGE LNTWPEDREK VKEMARRYSE LSEKKRRKKR VGLDQFIEKI NKGDSKKNKK 120 KKVKLGSTYK YPDWDPRFDN CSVEQLTELI QSLERSQTIL QHRLRAVVES QRQRNMHYRN 180 MAGQEQMIAT TTATATARND LQQHSNQVSM NLFNPGNGAL SQIPVSASAF NQAQSLAPIP 240 DSLTIYQNPS MERYMRLLGE QETGINTNML PYNNSVNVFP RQFYQNCFKV DDHTGFPGRQ 300 ETGINNVNVG DYSGSLWAQG TGINGLQNMD MYSYNSNNNT SGFSNQLVQF PTQRAASVFQ 360 SMDRSTQNIR HLYEM
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 93 | 97 | KKRRK |
2 | 93 | 98 | KKRRKK |
3 | 93 | 99 | KKRRKKR |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |