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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Tp2g28440 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family |
M-type_MADS |
Protein Properties |
Length: 364aa MW: 41810.9 Da PI: 9.2922 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp2g28440 | genome | thellungiella | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 73.4 | 1.8e-23 | 11 | 60 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+++++s + +++ kR+++++KKA+ELS+LC++ v+vi+++++g+l+++++
Tp2g28440 11 SSSSHSLAATSLRKRLKTVFKKAYELSILCQIGVCVIYYGPNGELKTWPK 60
7999********************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MRASSSSSSS SSSSHSLAAT SLRKRLKTVF KKAYELSILC QIGVCVIYYG PNGELKTWPK 60 EREKVIDLAL RYKAATKRKN SLNLHEFLEE KKEKEKDETN LKKKKKTKKR ESENVKYPDW 120 YPVFDQYSPN QLYQLILSLE RTLSRLQERL RFVEAQKQRN TNLVHQSLTP SSLNMHHHQY 180 QTQPLNPSQF SLYLYSREDA TFSQLPLSAS HSIQPINNQN HSMMQQQGLY GFDHRITNIN 240 FQYPCVSNTQ DHSALLLAQA SGLNNHLMQQ QDLYGSHRNM CTVNDITNSN VLRHPYLSNT 300 VPDEFCSDLQ KSLDGHSVGG TSFFQDFQDL HSANDQSSLL QTSSLPSLHT ISNSYLLPDN 360 SRFL
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