 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp2g28160 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
bHLH |
| Protein Properties |
Length: 360aa MW: 40159.1 Da PI: 6.1298 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp2g28160 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 14.5 | 6.5e-05 | 241 | 284 | 8 | 55 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
Er R +ri + + L +llP+ + + s +iL v+++k Lq
Tp2g28160 241 TERERKQRIDDNIKALAKLLPHE---TEEETS-ESILNDIVDHVKLLQ 284
69********************9...656555.789999999999998 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MDFNSVFQSL TELFPQIDAK MLRTVAMEHP TDADEAAAVV ISEVVPLFPQ NLVDKTRPRN 60
KESENLPDCK VERDMQDGDG SLSLSQWLHP SKFPQSYLAL LSEESTPDEK PPPDYVVKKM 120
VLPSRDAAAG AREGIRTIYS ASENGGINSS KTASSMVKPS VRVQSRTNNE PSGSSSKVPV 180
AGRSSSKSTH PWTQNYSEKL RSWKKRSNND KPDFSQLYGQ SKEAPSKSKQ SNKNKNKCYT 240
TERERKQRID DNIKALAKLL PHETEEETSE SILNDIVDHV KLLQLQMKEL SRSRLGGEPI 300
SHAMTFVEGY GHYIHQDETM TKPLEEIMGD LLENDSDAAV SLLESKGLYL MPLSSVQGLC
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK118145 | 1e-108 | AK118145.1 Arabidopsis thaliana At5g64980 mRNA for unknown protein, complete cds, clone: RAFL19-44-P05. |
| GenBank | BT029204 | 1e-108 | BT029204.1 Arabidopsis thaliana At5g64980 mRNA, complete cds. |
