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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp2g27820 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
ERF |
| Protein Properties |
Length: 398aa MW: 43503.4 Da PI: 7.4369 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp2g27820 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 62.7 | 8.1e-20 | 186 | 235 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrd + + +r++lg+f+ ae Aa+a+++a+++++g
Tp2g27820 186 RYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDNAESAARAYDEAALRFRG 235
7********.**********66.....56*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006970 | Biological Process | response to osmotic stress |
| GO:0009749 | Biological Process | response to glucose |
| GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MCAFKVANQE DNVGKKAEST TREDDHRTFS EIDQWLYLYA AEDDHLHRDN APTPPSSLMS 60
SFSREMEMSA IVSALTHVVA GNVPPHQYGG GEGSCGGGGE GTSNSSSSSG HKRRREVEEG 120
GGDGGKPVKA ANTLTVDQYL SGGSSSSRVR EASSNMSGSG PTYEYITTTN ANTETSSISG 180
DQPRRRYRGV RQRPWGKWAA EIRDPFKAAR VWLGTFDNAE SAARAYDEAA LRFRGNKAKL 240
NFPENVKLVR PASAATTQSV QQTAVQRPTQ SRNSGSTSTL LPIRPASDQI VHSQPLMQSY 300
NLSYSEMARH QQQFQQHHHQ QSMDLYDQMS FPLRFGHTGG STMQSTSSSS SYSRPLFTPA 360
AVQPPPESAS ETGYLQDLQW SPDKTSNNNN NYNNSPSS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Negative regulator of the abscisic acid (ABA) signaling pathway involved in seed germination and in responses to stress conditions. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16227468}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and stresses, including cold, drought and salt (PubMed:16227468, PubMed:26961720). Triggered by YY1 (PubMed:26961720). {ECO:0000269|PubMed:16227468, ECO:0000269|PubMed:26961720}. |
| Publications
? help Back to Top |
- Choi DS,Hwang BK
Proteomics and functional analyses of pepper abscisic acid-responsive 1 (ABR1), which is involved in cell death and defense signaling.
Plant Cell, 2011. 23(2): p. 823-42
[PMID:21335377] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Li T,Wu XY,Li H,Song JH,Liu JY
A Dual-Function Transcription Factor, AtYY1, Is a Novel Negative Regulator of the Arabidopsis ABA Response Network.
Mol Plant, 2016. 9(5): p. 650-661
[PMID:26961720] - Sanyal SK, et al.
Arabidopsis CBL interacting protein kinase 3 interacts with ABR1, an APETALA2 domain transcription factor, to regulate ABA responses.
Plant Sci., 2017. 254: p. 48-59
[PMID:27964784] - Choi SW,Lee SB,Na YJ,Jeung SG,Kim SY
Arabidopsis MAP3K16 and Other Salt-Inducible MAP3Ks Regulate ABA Response Redundantly.
Mol. Cells, 2017. 40(3): p. 230-242
[PMID:28292003]
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