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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp2g20050 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family |
bZIP |
Protein Properties |
Length: 324aa MW: 35068.2 Da PI: 9.2273 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp2g20050 | genome | thellungiella | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 50.6 | 4.2e-16 | 165 | 216 | 4 | 55 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55
+kr +r+ +NRe+ArrsR+RK+a + eLe+ v +L +eN++L k l +++
Tp2g20050 165 VKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRGENSKLLKGLTDVTQT 216
69****************************************9988776665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus |
GO:0071333 | Biological Process | cellular response to glucose stimulus |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MEKVFSVEEI SGNHLWSELA KDTGGTTAIN RSASEWAFHR FIQESSAAAD VASGGETATA 60 CGVSVSGPPS PSVPIDSEEY REFLKNKLNL ACAAVAMKRG DFIKLQDTSG RSENGGAHTS 120 SASEQGSLAS SKATTVMSNA ITSGSELSGD EEEADGETNM NPTHVKRVKR MLSNRESARR 180 SRRRKQAHLS ELETQVSQLR GENSKLLKGL TDVTQTFNDA AVENRVLKAN IETLRAKVKM 240 AEETVKRITG FNPMVHTIPR VSTVSLPSET SNSLDTSIQV SKPEISSGNK SKALIGCKMN 300 RTDSMRRVAS LEHLQKRIRS VGDQ
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 178 | 185 | RRSRRRKQ |
2 | 180 | 185 | SRRRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in controlling responses to starvation (PubMed:26263501). BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000269|PubMed:26263501, ECO:0000269|PubMed:29348240}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Strongly repressed by glucose. {ECO:0000269|PubMed:18841482}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK353265 | 0.0 | AK353265.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-34-D15. |
Publications
? help Back to Top |
- Brand LH,Kirchler T,Hummel S,Chaban C,Wanke D
DPI-ELISA: a fast and versatile method to specify the binding of plant transcription factors to DNA in vitro. Plant Methods, 2010. 6: p. 25 [PMID:21108821] - Brand LH, et al.
Screening for protein-DNA interactions by automatable DNA-protein interaction ELISA. PLoS ONE, 2013. 8(10): p. e75177 [PMID:24146751] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Mair A, et al.
SnRK1-triggered switch of bZIP63 dimerization mediates the low-energy response in plants. Elife, 2016. [PMID:26263501] - Pedrotti L, et al.
Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]
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