PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp2g19620 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family | G2-like | ||||||||
Protein Properties | Length: 197aa MW: 22372.2 Da PI: 9.3625 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 71.1 | 1.7e-22 | 22 | 75 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r++W +eLH++F++av+++ Gs kA+P tile m+v g+t+e+v+SHLQk+R+ Tp2g19620 22 KRRVVWDKELHNKFLKAVDEI-GSSKAVPTTILEKMNVGGITRENVASHLQKHRV 75 689******************.9*******************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.549 | 19 | 78 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 7.53E-16 | 20 | 79 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.8E-22 | 20 | 79 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.0E-21 | 22 | 75 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.6E-6 | 24 | 74 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence Send to blast |
MALNGKANEV DREHDRDSNT KKRRVVWDKE LHNKFLKAVD EIGSSKAVPT TILEKMNVGG 60 ITRENVASHL QKHRVNLEKE KEKKTIEERN RSLAPPQRGG MYNGGRSNDY NEEVDAISNL 120 ISRFSQNSEM VSLFHLLEPV MATTMLPEPS RLHVPSFPSS LTDISSLNQN KKPVLMVDVT 180 RGFNYNNSYS VHEQQQG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 4e-19 | 21 | 79 | 4 | 62 | ARR10-B |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp2g19620 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018462133.1 | 3e-38 | PREDICTED: two-component response regulator ARR10-like, partial | ||||
TrEMBL | A0A3P6D6I5 | 7e-28 | A0A3P6D6I5_BRAOL; Uncharacterized protein | ||||
STRING | Bra020652.1-P | 2e-28 | (Brassica rapa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM15903 | 7 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 4e-20 | response regulator 1 |