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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Tp2g14970 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
bHLH |
| Protein Properties |
Length: 342aa MW: 38831.3 Da PI: 6.4489 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp2g14970 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 43.9 | 4.2e-14 | 133 | 179 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++h+e+ErrRR+riN+ +++Lr++lP+ +K +Ka+ L ++++++k+L
Tp2g14970 133 KSHSEAERRRRERINTHLAKLRSILPNT-----TKTDKASLLAEVIQHMKEL 179
79*************************9.....8****************99 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
| GO:0016036 | Biological Process | cellular response to phosphate starvation |
| GO:0080147 | Biological Process | root hair cell development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MYAMKEEDCL QTFHNLQDYQ DQFLLHHHPQ ILPWSPLPSF DPTHFPSNPT RYPDPVPYFN 60
RRASSSTSSF DYTDGFISPP PSMDHHHPNH LRILSEALGP IMRRGSSFGF DGEIMGKLSA 120
QEVMDAKALA ASKSHSEAER RRRERINTHL AKLRSILPNT TKTDKASLLA EVIQHMKELK 180
RQTSLITDTC QVPTESDDLT IDSTYNDEEG NLVIRASFCC QDRTGLMHDV INALKSLRLR 240
TLKAEIATIG GRVKNVLFLS REDDGDDDGA GYRRNFDGDD VENDNEGKRY NRVSSIEEAL 300
KVVIEKCVNN NDENNDNNNL EKSSSGSIKR QKTSKMVNRC YN
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor required for MONOPTEROS-dependent root initiation in embryo. Transcriptionally controlled by MONOPTEROS. {ECO:0000269|PubMed:20220754}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY058840 | 0.0 | AY058840.1 Arabidopsis thaliana AT3g25710/K13N2_1 mRNA, complete cds. |
| GenBank | AY079033 | 0.0 | AY079033.1 Arabidopsis thaliana AT3g25710/K13N2_1 mRNA, complete cds. |
| GenBank | AY086383 | 0.0 | AY086383.1 Arabidopsis thaliana clone 247881 mRNA, complete sequence. |
| GenBank | DQ205679 | 0.0 | DQ205679.1 Arabidopsis thaliana ABA-regulated protein AIG1 mRNA, complete cds. |
| Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ohashi-Ito K, et al.
A bHLH complex activates vascular cell division via cytokinin action in root apical meristem.
Curr. Biol., 2014. 24(17): p. 2053-8
[PMID:25131670] - Jost R, et al.
Differentiating phosphate-dependent and phosphate-independent systemic phosphate-starvation response networks in Arabidopsis thaliana through the application of phosphite.
J. Exp. Bot., 2015. 66(9): p. 2501-14
[PMID:25697796] - Vera-Sirera F, et al.
A bHLH-Based Feedback Loop Restricts Vascular Cell Proliferation in Plants.
Dev. Cell, 2015. 35(4): p. 432-43
[PMID:26609958] - Katayama H, et al.
A Negative Feedback Loop Controlling bHLH Complexes Is Involved in Vascular Cell Division and Differentiation in the Root Apical Meristem.
Curr. Biol., 2015. 25(23): p. 3144-50
[PMID:26616019] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470]
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