 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp2g05390 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
MYB_related |
| Protein Properties |
Length: 242aa MW: 27064.3 Da PI: 4.5705 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp2g05390 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 36.2 | 1.4e-11 | 194 | 223 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30
r++W++eEde l+ avk++G g+W++Ia++
Tp2g05390 194 RKKWSAEEDEELIAAVKRHGEGSWALIAKE 223
799*************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MVDSSNKKRK EFISEGDIAT LLQRYDTMTI LKLLQEMSYY AEPKIDWNEL VKKTSTGITN 60
AREYQLLWRH LAYRDSLLPM EDNAQLPDDD SDMECELEAS PAVNVDAVAE AVAHVKVIAA 120
SYVPSESDIP EDSTFEAPLT INIPYGLHRG PQEPSDSYWS SRGMNITFPV SLQKAAEGHN 180
GNGLGSSMAP RKRRKKWSAE EDEELIAAVK RHGEGSWALI AKEEFEGERT ASQLSQVVLL 240
FG
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK117128 | 0.0 | AK117128.1 Arabidopsis thaliana At1g58220 mRNA for putative MYB-family transcription factor, complete cds, clone: RAFL16-66-J10. |
| GenBank | AY519547 | 0.0 | AY519547.1 Arabidopsis thaliana MYB transcription factor (At1g58220) mRNA, complete cds. |
| GenBank | BT005971 | 0.0 | BT005971.1 Arabidopsis thaliana At1g58220 gene, complete cds. |
