 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Tp2g02240 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
TALE |
| Protein Properties |
Length: 390aa MW: 43818.2 Da PI: 6.7604 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp2g02240 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 29 | 1.9e-09 | 316 | 350 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yps++++ LA+++gL+++q+ +WF N+R ++
Tp2g02240 316 KWPYPSEQQKLALAESTGLDQKQINNWFINQRKRH 350
569*****************************885 PP
|
| 2 | ELK | 41 | 4e-14 | 270 | 291 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK qLlrKYsgyLgsLkqEF+
Tp2g02240 270 ELKGQLLRKYSGYLGSLKQEFM 291
9********************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009934 | Biological Process | regulation of meristem structural organization |
| GO:0048440 | Biological Process | carpel development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 390 aa
Download sequence Send
to blast |
MESGSNSTSC PMAFAGDNSD GPMCPMMMMM MPVMTSNQHQ QHHGHGPQHQ HQQQQHDGYA 60
YQSHHQQSSS LFLQSLAPPP SQETKNKVAS SSSPSSCAPA YSLMEIHHQN DLVAGGLNPC 120
SSSSSSASVK AKIMAHPHYH RLLLAYVNCQ KVGAPPEVQA RLEETCSSAA AAAASMGPTG 180
SLGEDPGLDQ FMEAYCEMLV KYEQELSKPF KEAMVFLQRV ECQFKSLSLS SPSSFSGYGE 240
TTIDRNNNGS SEEEVDMNNE FIDPQAEDRE LKGQLLRKYS GYLGSLKQEF MKKRKKGKLP 300
KEARQQLLDW WSRHYKWPYP SEQQKLALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFV 360
VMDATHPHHY FMDNVLGNPF PIDHITSNML
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 285 | 294 | LKQEFMKKRK |
| 2 | 291 | 295 | KKRKK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Required for shoot apical meristem formation during embryogenesis. Probably binds to the DNA sequence 5'-TGAC-3' (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | GU480585 | 0.0 | GU480585.1 Brassica rapa SHOOT MERISTEMLESS (STM) mRNA, complete cds. |
