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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Tp2g00370 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
ERF |
| Protein Properties |
Length: 139aa MW: 15826.1 Da PI: 10.6818 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp2g00370 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 57.9 | 2.5e-18 | 79 | 129 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+G r+++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+ge
Tp2g00370 79 LYRGMRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 129
59******9.**********954...5**************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 139 aa
Download sequence Send
to blast |
MDTPGQAPKK LGSSVYLRQR DLIERLHLQS RAISTPPPLF SSSYDHQASE LMLQAGSATP 60
AAAFAAVLAA ERTAKKKKLY RGMRQRHWGK WVAEIRLPQN RMRVWLGTYD TAEAAAYAYD 120
RAAYKLRGEY ARLNFQNPW
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC066689 | 1e-128 | AC066689.5 Arabidopsis thaliana chromosome 1 BAC F15H21 genomic sequence, complete sequence. |
| GenBank | AK228763 | 1e-128 | AK228763.1 Arabidopsis thaliana mRNA for AP2-containing DNA-binding protein, complete cds, clone: RAFL16-09-E15. |
| GenBank | AY560876 | 1e-128 | AY560876.1 Arabidopsis thaliana putative AP2/EREBP transcription factor (At1g64380) mRNA, complete cds. |
| GenBank | BT033082 | 1e-128 | BT033082.1 Arabidopsis thaliana unknown protein (At1g64380) mRNA, complete cds. |
| GenBank | CP002684 | 1e-128 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
