 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp1g26900 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
bHLH |
| Protein Properties |
Length: 323aa MW: 36510.6 Da PI: 7.6744 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp1g26900 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 14 | 9.4e-05 | 214 | 247 | 15 | 53 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
++++++ +L++++ + +K + a++L++A+ YI+
Tp1g26900 214 KLRDKITTLQQIVSPF-----GKTDTASVLQEAITYINF 247
7899999999999998.....8***************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MDHHHHHHHN HITSSRNNSS STTSELPFEP VCDNANGNGW IYDTNQVRYD QSSEQRLSKL 60
TDLVGKHWSL APPNNPDMNH NVHHHFDQTN DDVSMYRQAL EVKNEEDLCY NNGLSGGVSL 120
FHDAIESSRS FLDIRLSRPL TDINPSFKPC FKALNLSEFN KNEHQTASLA TARLGTTNAG 180
KKKRCDEVSD EVSKKAKCGG GATLSPDKEL PKAKLRDKIT TLQQIVSPFG KTDTASVLQE 240
AITYINFYQE QVKLLSTPYM KNSSIKDPWG GWDREDHNKR GPKHLDLKSR GLCLVPISCT 300
PIAYRDNTAT DYWSPSYRGS LYR
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB493488 | 0.0 | AB493488.1 Arabidopsis thaliana At1g31050 mRNA for hypothetical protein, partial cds, clone: RAAt1g31050. |
