 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Tp1g22410 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
bHLH |
| Protein Properties |
Length: 423aa MW: 46353.1 Da PI: 5.8009 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp1g22410 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 27.8 | 4.4e-09 | 258 | 306 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq
Tp1g22410 258 NSHSLAERIRREKISERMKFLQDLVPGC----DKVTGKAVMLDEIINYVQSLQ 306
58*************************9....555*****************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009911 | Biological Process | positive regulation of flower development |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 423 aa
Download sequence Send
to blast |
MDTSDKVDFA AKNSNCDNGV ENFDSVNTSA DWRISASSPP VSYHPDNPIQ ICQTSCSPSQ 60
MMDSSRQNLW HEGGFNVRTD AGTSNVMASF RGNIERPLEM GWSMTQFPAD SGFTERAARF 120
SLLGCGGFSE MMMNQQSLGA PDSVGLFLQD TEIASGSNLG DGGPHKLVKD RSNGSSNVSE 180
DSHSSGGNGK KRKRIGKDSE ADQSRRAQRS GEEQEDKKQK DEQSPNSNAN KTNSGKQASD 240
PFKDGYIHMR ARRGQATNSH SLAERIRREK ISERMKFLQD LVPGCDKVTG KAVMLDEIIN 300
YVQSLQCQIE FLSMKLSTVN PLLDFNLESL IAKDALQSSA PTFVQSMSML YPPLSYLSQT 360
GITQRNLSSV SPLNGGLQRQ EIHGYESDHH NIVPMNHGTG TAPDHDDATA AEEESRVRSN 420
NIV
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508). {ECO:0000269|PubMed:23161888, ECO:0000269|PubMed:24130508}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AJ630483 | 0.0 | AJ630483.1 Arabidopsis thaliana mRNA for hypothetical protein, clone At1g26260. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT1G26260.2 | 1e-173 | cryptochrome-interacting basic-helix-loop-helix 5 |
