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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp1g09110 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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| Family |
C2H2 |
| Protein Properties |
Length: 209aa MW: 23151.8 Da PI: 9.6313 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp1g09110 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 15.5 | 5.1e-05 | 61 | 82 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
+C++Cgk F ++ L H++ H
Tp1g09110 61 ECQYCGKEFANSQALGGHQNAH 82
7******************988 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009736 | Biological Process | cytokinin-activated signaling pathway |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0010026 | Biological Process | trichome differentiation |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 209 aa
Download sequence Send
to blast |
MSISPTMSRT GESSSGSSSD KTLKLFGFEL ISGNRSPEVT TADSVSSSTN NTASFTAKRL 60
ECQYCGKEFA NSQALGGHQN AHKKERLKKK RLQLQARRAS IGYYLTSHQQ PITGSLQRQY 120
KTPSYCAFSS MHVNNQMGVF NEEWSSMSSQ ISFGNKETCQ DPEPNGEMGK MYGVRQNMIQ 180
FQRDLTSRSD SKRSVQSLDL HLGFAGDTA
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor required for the initiation of inflorescence trichomes in response to gibberellin (GA). Acts upstream of GIS, GIS2, ZFP8 and the trichome initiation regulators GL1 and GL3 (PubMed:21803862, PubMed:22301962). Binds the promoter region of ZFP8, which may be a direct target of ZPF5 (PubMed:21803862). Is not involved in the regulation of trichome branching (PubMed:22301962). Modulates root hair initiation and elongation in response to cytokinin and ethylene signals by directly promoting expression of the CAPRICE (CPC) gene (PubMed:22762888). {ECO:0000269|PubMed:21803862, ECO:0000269|PubMed:22301962, ECO:0000269|PubMed:22762888}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cytokinin and ethylene. {ECO:0000269|PubMed:22762888}. |
| Publications
? help Back to Top |
- Heyndrickx KS,Vandepoele K
Systematic identification of functional plant modules through the integration of complementary data sources.
Plant Physiol., 2012. 159(3): p. 884-901
[PMID:22589469] - Savage LJ,Imre KM,Hall DA,Last RL
Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins.
PLoS ONE, 2013. 8(9): p. e73291
[PMID:24023856] - Sun L, et al.
GLABROUS INFLORESCENCE STEMS3 (GIS3) regulates trichome initiation and development in Arabidopsis.
New Phytol., 2015. 206(1): p. 220-30
[PMID:25640859] - Yu D, et al.
RPN1a, a subunit of the 26S proteasome, controls trichome development in Arabidopsis.
Plant Physiol. Biochem., 2015. 88: p. 82-8
[PMID:25676129] - Kim SY,Hyoung S,So WM,Shin JS
The novel transcription factor TRP interacts with ZFP5, a trichome initiation-related transcription factor, and negatively regulates trichome initiation through gibberellic acid signaling.
Plant Mol. Biol., 2018. 96(3): p. 315-326
[PMID:29335898]
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