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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp1g06350 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
Dof |
| Protein Properties |
Length: 328aa MW: 35193.7 Da PI: 10.0946 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp1g06350 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 122.2 | 1.7e-38 | 70 | 128 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
e alkcprCds ntkfCyynny+l+qPr+fCkaCrryWt+GGalrnvPvGgg+r+n k+
Tp1g06350 70 EGALKCPRCDSINTKFCYYNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNSKK 128
5689***************************************************9876 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0003002 | Biological Process | regionalization |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009611 | Biological Process | response to wounding |
| GO:0009625 | Biological Process | response to insect |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0010439 | Biological Process | regulation of glucosinolate biosynthetic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MPTNSIHHQH QLHENGSLVS GHGLLSHQLP PFPPNPNPNH HHAAASSGLP ARLGGSMAER 60
ARQAKAPPPE GALKCPRCDS INTKFCYYNN YNLTQPRHFC KACRRYWTRG GALRNVPVGG 120
GCRRNSKKGK NGNSKSSSSS KQSSSTVNAP SSSSGQLRTN HQFPFLPTLQ NLTQLGGIGL 180
NLAATNGTNQ AHQIGSNLMN DLGFLNVGNG RNTSAPITGN IHDNNNNNSE NNIMASAGFA 240
LFDPTTGLYA FQNEGNIGNN VGISFSSTSM VDSRNYQTAP VKMEQQPNPA NLSRPVSGLT 300
SPGNQTNQYF WSNSDFSGPS SNDHHQLL
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements (By similarity). Involved in the regulation of root development (PubMed:23057675). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). Element of a regulatory network controlling indole glucosinolates (IGS) biosynthesis, probably by inducing the expression of accurate genes (e.g. CYP83B1). Promotes apical dominance (PubMed:16740150). {ECO:0000250|UniProtKB:Q9M2U1, ECO:0000269|PubMed:16740150, ECO:0000269|PubMed:23057675, ECO:0000269|PubMed:30626969}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By auxin and salicylic acid (SA) (PubMed:10758484). Induced transiently in response to the generalist herbivore S.littoralis. Triggered by methyl jasmonate (MeJA) and wounding (PubMed:16740150). {ECO:0000269|PubMed:10758484, ECO:0000269|PubMed:16740150}. |
