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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thhalv10028688m |
Common Name | EUTSA_v10028688mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family |
bZIP |
Protein Properties |
Length: 420aa MW: 46280.9 Da PI: 5.6791 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10028688m | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 50.1 | 5.9e-16 | 220 | 273 | 3 | 56 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
++k+ rr+ +NRe+ArrsR+RK++++ Le+ v eL++e ++L +l++++ ++
Thhalv10028688m 220 DVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNELKGEHSSLLRQLSNMNHKY 273
789**************************************9998887777665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0002240 | Biological Process | response to molecule of oomycetes origin |
GO:0009626 | Biological Process | plant-type hypersensitive response |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000693 | Biological Process | positive regulation of seed maturation |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 420 aa
Download sequence Send
to blast |
MNSIFSIDDF SDPFWEAPPP LNSNPAKVVT AEEVSQSQSE WTFEMFLEEI SSSVSSEPVG 60 NNNAIVGVSS AQSLPSVSGQ NDFEEDSRFR RDRHDRDSGN RDYAPPPSTV IVHSDDYHRV 120 LKNKLETECA TVVALRTGSV KPEDSSTSPE TQFQPAQSSP LAQGSLMTPG ELGVSSSSPA 180 ELKKTGVLAK QVTSGSSREY SDDDDLDEEN ETTGSLKPED VKKSRRMLSN RESARRSRRR 240 KQEQTSDLET QVNELKGEHS SLLRQLSNMN HKYDDAAVGN RILKADIETL RAKVKMAEET 300 VKRVTGMNPM LLGRSNGHSN NNRMPLTGNN RMDSSCIPAF QPQSNLNHLP NPNIGIPAIL 360 PPRLGNNFVA PPSLNSQTNS QLQRIRNSQN HHVAPTSTNP YGWNTEPQND SAWPKKCVD*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 234 | 241 | RRSRRRKQ |
2 | 236 | 241 | SRRRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the C-box-like motif (5'-TGCTGACGTCA-3') and G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of gene promoters. Binds to the 5'-ACGT-3' motif of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. Involved in the defense responses to the biotrophic pathogen Hyaloperonospora parasitica and oxidative stress responses; mediates positively cell death (PubMed:12657652, PubMed:16957775, PubMed:19261733, PubMed:19531597). Promotes BZIP53-mediated response to hypoosmolarity stress that leads to POX1/PRODH1 accumulation (PubMed:16810321). {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:16810321, ECO:0000269|PubMed:16957775, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK353546 | 0.0 | AK353546.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-51-H19. |