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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thhalv10027117m | ||||||||
Common Name | EUTSA_v10027117mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family | bZIP | ||||||||
Protein Properties | Length: 246aa MW: 28612.8 Da PI: 5.9159 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.1 | 3.3e-12 | 133 | 178 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ +r+++NRe+ArrsR RK+ i++L++ v L+ eN++L ++l Thhalv10027117m 133 RKRKRMESNRESARRSRMRKQSHIDNLRNQVNRLDLENRELGNRLR 178 67899**********************************9995554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-10 | 124 | 179 | No hit | No description |
SMART | SM00338 | 5.9E-14 | 129 | 193 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.887 | 131 | 194 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.0E-9 | 133 | 177 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.53E-10 | 133 | 182 | No hit | No description |
CDD | cd14702 | 2.59E-17 | 134 | 180 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 136 | 151 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MLSTVPAFSF SEPGLVNHFS GFQTGFTPWE WDSPDLFSVN QLSLEPAVPS PCYCESDTGL 60 VRINSGFDDT KSGSDEPCAD FIETKPRFDD VDISHGEPDS DDPKHLTSNP NLDSGEQNHN 120 RNIFSQPEMT DERKRKRMES NRESARRSRM RKQSHIDNLR NQVNRLDLEN RELGNRLRLV 180 IYQLQRVNTD NNRLLTEQEI LRLRLSEMRR ILINRQLQQQ QHWELYNRRM NMAAQNPSSI 240 IDHMI* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 145 | 152 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Thhalv10027117m |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006411856.1 | 0.0 | basic leucine zipper 61 | ||||
TrEMBL | V4MAA1 | 0.0 | V4MAA1_EUTSA; Uncharacterized protein | ||||
STRING | XP_006411856.1 | 0.0 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7855 | 18 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37730.1 | 1e-107 | basic leucine-zipper 7 |
Link Out ? help Back to Top | |
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Phytozome | Thhalv10027117m |
Entrez Gene | 18030103 |