 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Thhalv10026864m |
| Common Name | EUTSA_v10026864mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
|
| Family |
WRKY |
| Protein Properties |
Length: 539aa MW: 58323.8 Da PI: 5.9352 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10026864m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.5 | 8.9e-31 | 297 | 355 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
Thhalv10026864m 297 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAgGCPVRKQVQRCAEDRSILITTYEGNHNHP 355
7****************************9****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 539 aa
Download sequence Send
to blast |
MFRFPVSLGG SRDEARHDQI TPLDERRVVV GEVDFFSEKR DRVSRENIND DDEEPNKVHV 60
KMENSRAEDN DRSRDVNIGL NLLTANTGSD ESTVDDGLSM DMEDKRAKIE NAQLQEELKK 120
MKIENQRLRE MLSQATNNFN SLQMQLVAVM RQQEQRISSQ DHLLATEGNA VGRKLPEVQA 180
MIPRQFMDLG PSSGAAEHDA EVSSEERTMV LSGSPPSLLE SSNPRESGKR LLGREESPES 240
ESNAWGNPNK VPKHNPPSGN NNNSNGNGNV IDQSAAEATM RKARVSVRAR SEATMITDGC 300
QWRKYGQKMA KGNPCPRAYY RCTMAGGCPV RKQVQRCAED RSILITTYEG NHNHPLPPAA 360
MAMASTTTAA ASMLLSGSMS SQDGLMNPTN LLARAILPCS SSMATISASA PFPTITLDLT 420
NSSNGNTSNI GTNNPLMQFA QRPGFNPAVL PQVVGQALYY NQQQSKFSGL QLPAQPLQIA 480
TTSSMAESVS AASAAIASDP NFAAALAAAI TSIINGSSHQ NNSNNNTNVA TSNGDNRQ*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KC246577 | 0.0 | KC246577.1 Brassica napus WRKY transcription factor 31.1 (WRKY31.1) mRNA, complete cds. |
