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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Thhalv10025083m |
| Common Name | EUTSA_v10025083mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
|
| Family |
TALE |
| Protein Properties |
Length: 479aa MW: 54347.1 Da PI: 6.7211 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thhalv10025083m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 25.4 | 2.4e-08 | 396 | 434 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
+F++ ++yp+ +e+ LA + gLt +qV++WF N R +
Thhalv10025083m 396 MFQNflHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVR 434
5887779******************************88 PP
|
| 2 | BELL | 89.8 | 2.8e-29 | 271 | 341 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
+rq+l++kk++Ll+ll++Vd+rY ++ ++++tv+s+F+a+++l++ +++t++Alk+iS+ +++L+++i++ i
Thhalv10025083m 271 QRQALEAKKTHLLDLLQMVDDRYTHCIDEIHTVVSAFHAATELDP-QLHTRFALKTISFLYKNLRERISKNI 341
689******************************************.**********************9987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0008285 | Biological Process | negative regulation of cell proliferation |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0010073 | Biological Process | meristem maintenance |
| GO:0010227 | Biological Process | floral organ abscission |
| GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
| GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
| GO:0090470 | Biological Process | shoot organ boundary specification |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 479 aa
Download sequence Send
to blast |
MDNDNTYSSL DNVMTNQNPL LMDLIPSRED STSFSTMLPW NSIRSDPLQM GSFDIFNSLL 60
ANKYLSSTSR STNVQETSNI ESFEVMAPPP PPPPLHPLNH LRPYDDSSNN MWSFGENSEF 120
FQAYSCAEGV VGPSEPIMST FGEEDFPFLI SNKRNELSLS LATDVSDECS EISLCAATKS 180
TRIASEQASC SSKDISNNVS EVIFGSKYLH SVQEILSHFA AYSLEGLENN PHRYSSRGTE 240
SRAANSAYTN LTEFLDGGFN NSEAGFGSTS QRQALEAKKT HLLDLLQMVD DRYTHCIDEI 300
HTVVSAFHAA TELDPQLHTR FALKTISFLY KNLRERISKN ILMMGSVLER GKEKSQENSM 360
FHQHCLLQQL KRKNHQIWRP QRGLPEKSVS VLRTWMFQNF LHPYPKDSEK HLLAIRSGLT 420
RSQVSNWFIN ARVRLWKPMI EEMYAEMNKR KLNNTHLQGN GASLRMPKSI MMSQQREK*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269|PubMed:17908157}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By light. In etiolated seedlings, maximally expressed after 3 days of illumination. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY072174 | 0.0 | AY072174.1 Arabidopsis thaliana putative homeobox gene ATH1 protein (At4g32980) mRNA, complete cds. |
| GenBank | AY096513 | 0.0 | AY096513.1 Arabidopsis thaliana putative homeobox gene ATH1 protein (At4g32980) mRNA, complete cds. |
| GenBank | X80126 | 0.0 | X80126.1 A.thaliana AtH1 mRNA. |
