|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Thhalv10024895m |
Common Name | EUTSA_v10024895mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
|
Family |
bZIP |
Protein Properties |
Length: 530aa MW: 58407.6 Da PI: 7.226 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10024895m | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.6 | 7.1e-10 | 387 | 445 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr +r NR +A rs +RK +i eLe kv++L++e ++L +l l+ + l++++
Thhalv10024895m 387 KRVKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQLTLLQRDMMGLTNQN 445
899******************************************99998877777665 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005829 | Cellular Component | cytosol |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 530 aa
Download sequence Send
to blast |
MGDTEKCNTD MIQRLHSSFG TSSSSIPKQP ISLNQQLEIP QLNPNFMRSA QFPQFSQPFS 60 DSGKRIPSRI PPTSPYSQIP TTRQQPGSQS FNPGATHSRS LSQPSSFFSF DSLPPLSPSP 120 FRDHDVSMED RDSGGFNNNP SLLPPSPFTR CNSTSSRVVA AGESLPPRKS HRRSNSDIPT 180 GFNSSSMPPR PLERSISGGE CADWSKTTPF VKKESSCERE GAGDREAMDD LFSAYMNLEN 240 IDVLNSSEAD DSKNGNENRD DMESSRASGT KTNGSDTEGE SSSVNESGNH NNKRRAGGVD 300 IAPTSRHYRS VSVDSCFMEK LSFGDDSLKP PPSPGTVSRK VSPTNSVDAN QGAAFSIEFK 360 NGEFTAAEMK KIMANDKLAE MAMSDPKRVK RILANRQSAA RSKERKMRYI VELEHKVQTL 420 QTEATTLSAQ LTLLQRDMMG LTNQNNELKF RLQAMEQQAR LRDALNEALN GEVQRLKLAV 480 GETSHNESDR SKMQSLNAEM FQQLNISQLR QQPQQNQNGT MSTKPESSE*
|