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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thhalv10023682m |
Common Name | EUTSA_v10023643mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family |
bHLH |
Protein Properties |
Length: 222aa MW: 24505.6 Da PI: 7.4516 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10023682m | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 33.7 | 6.4e-11 | 145 | 192 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq
Thhalv10023682m 145 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 192
8*************************9....677*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MDPSGMMNEG GPFNLAEIWQ FPFNGVSTAG DSSARGNQFA DSNLNTTTAV GDAARISHAL 60 SQAVIEGISG AWKRRDESAK VVSTTSNYNG ASEGDKKRQK IDEECDEKTE AGFSSETKMD 120 QKKQQIDPTK DYIHVRARRG QATDSHSLAE RARREKISER MKILQDLVPG CNKVIGKALV 180 LDEIINYIQS LQRQVEVKTS VSLFSIVCLL YVHVCFVRLY L*
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Functional Description ? help
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Source |
Description |
UniProt | Involved in the control of petal size, by interfering with postmitotic cell expansion to limit final petal cell size. {ECO:0000269|PubMed:16902407}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Isoform 1 is up-regulated by PI/AP3, SEP2, SEP3 and AP1, but repressed by AG. {ECO:0000269|PubMed:16902407}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB028232 | 1e-105 | AB028232.1 Arabidopsis thaliana ZCW32 mRNA for helix-loop-helix protein homolog, complete cds. |
GenBank | AM269753 | 1e-105 | AM269753.1 Arabidopsis thaliana mRNA for basic helix loop helix protein (bpe gene), BPE normal splice form. |
GenBank | AM269754 | 1e-105 | AM269754.1 Arabidopsis thaliana mRNA for basic helix loop helix protein (bpe gene), BPEp splice form. |
GenBank | AY086373 | 1e-105 | AY086373.1 Arabidopsis thaliana clone 24644 mRNA, complete sequence. |
GenBank | BT003964 | 1e-105 | BT003964.1 Arabidopsis thaliana clone RAFL15-08-I05 (R20798) putative bHLH protein (At1g59640) mRNA, complete cds. |
GenBank | BT005064 | 1e-105 | BT005064.1 Arabidopsis thaliana clone U20798 putative bHLH protein (At1g59640) mRNA, complete cds. |