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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Thhalv10023534m |
Common Name | EUTSA_v10023533mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Family |
bZIP |
Protein Properties |
Length: 373aa MW: 42021.6 Da PI: 9.6762 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Thhalv10023534m | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 23.5 | 1.2e-07 | 241 | 287 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
A+rsR RK+++i eLe+ v++L+ae ++ el+ l++ l +e+
Thhalv10023534m 241 AQRSRVRKLQYISELERNVQALQAEGSKVSAELDFLNQRNLILSMEN 287
89********************************9999887777666 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MANSKGSQSV KDLTYPGKNA LLPPKIPFPS VSAPYSEYIP SGSIGSRHNQ KLSVEKTHHQ 60 RTSSESDLVE EPPFWLDDLL NEPESPVRKC GHRRSSSDSY AYLDMANAKN ISLTLQNDFS 120 YRNVGSSNQR GTQELDWNKN AQDAAFYPDA NFLKQTIRQR ESLVASGPRS SWLPFTRESV 180 GGKHMGPSYM SQEATVKSET KNYAKTLSHE AKKFSPEEKN SSPQPGTYDA DNTRRAKQQF 240 AQRSRVRKLQ YISELERNVQ ALQAEGSKVS AELDFLNQRN LILSMENKAL KHRLESIAQE 300 KLLKQLEQEV LEKEIGRLRA LYQQQQQTNQ PSASHGRSTS KDLDSQFSSL SLNTKDSNCR 360 RDSVSVTGQF HF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK352929 | 0.0 | AK352929.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-09-A16. |